EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DEHSB (50S ribosomal protein L13 OS=Dehalococcoides sp. (strain BAV1) GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA G+VLG +A++ A + GK KP + N D GD +++NAK I VTG KL K+YY H+G+ G ++ L + ++ P I AV M+PRN ++ G+EHP Sbjct: 15 WHVIDASGRVLGEVAAEAAKYLMGKHKPMFCRNLDCGDYVVIVNAKKITVTGNKLDQKMYYRHSGFPGGFRQEKLGDLLKTKPLFVIEHAVKGMIPRNTLGAQILAKLKVYEGAEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CHLTE (50S ribosomal protein L13 OS=Chlorobium tepidum GN=rplM PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20 Identity = 43/117 (36.75%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W + DA+ QVLGR+A+Q+A V++GK KP + P+ D GD +V NA + ++G+K +K Y+ H+ Y G ++ ++K+ +++ P + I AV MLP N ++ G EHP Sbjct: 21 WHIIDAENQVLGRMAAQIANVLRGKHKPQFTPHIDTGDFVVVTNAAKVALSGKKRDDKTYFSHSHYPGGVRIDSVKDLLQKKPEKVIEHAVWGMLPHNNLGRQLFKKLKVYAGPEHP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_XANP2 (50S ribosomal protein L13 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 53/119 (44.54%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA G V+GRLA+ +A ++GK P Y P+ D GD +V+NA+ TGRK KVYY HTG+ G +KERT K +E R P I KAV RML R ++ G HP Sbjct: 14 KWVVIDASGLVVGRLATIIAMRLKGKHLPIYTPHVDCGDNIVVVNAEKAVFTGRKKDQKVYYHHTGFPGGIKERTAKFVLEGRFPERVIEKAVERMLARGPLGRKIMGNLRVYKGPSHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAHJ (50S ribosomal protein L13 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 45/118 (38.14%), Postives = 72/118 (61.02%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD I++NA I +TG+K +K+YY H+ + G +K T E +P + ++ MLP + ++ G+EHP Sbjct: 15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAAKIELTGKKESDKIYYRHSNHPGGIKSVTAGELKRNNPERLLETSIKGMLPSSRLGEKQGKKLFVYGGAEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SHEAM (50S ribosomal protein L13 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA+G+ LGR+A+++A+ ++GK KP Y P+ D GD IV+NA+ + VTG K K+YY H+G+ G +KE ++ P I KAV MLP+ ++ G+EH Sbjct: 15 WYVVDAEGKTLGRIATEIASRLRGKHKPEYTPHVDTGDYIIVINAEKVTVTGNKAAGKMYYSHSGFPGGIKEINFEKLQAHKPEMIIEKAVKGMLPKGPLGRAMFRKLKVYAGAEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RICPR (50S ribosomal protein L13 OS=Rickettsia prowazekii GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 56/136 (41.18%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLK---NKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIRDASS 647 +W V DAK VLGRLAS+VA +++GK KP++ P+ D GD I++NA+ I +TG+KL KVYY HTG+ G +K+ T + + + P I+ AV RM+ RN ++ EHP P TI D +S Sbjct: 14 KWWVIDAKNVVLGRLASRVAIMLRGKHKPSFTPHLDCGDNIIIINAEHIKLTGKKLNPKDGKVYYRHTGFPGGIKDTTAGKILSGKYPERVIKMAVKRMITRNVLGAKQMSNLYVYANCEHPHMAQQP-TIYDFAS 148
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCGI (50S ribosomal protein L13 OS=Mycobacterium gilvum (strain PYR-GCK) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA VLGRLA + A +++GK KPT+ PN D GD I++NA I ++G KL K Y H+GY G L++R + + + + PT + A+ MLP ++ G EHP P Sbjct: 15 WYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDGGDFVIIINADKISLSGDKLTKKFAYSHSGYPGGLRKRAIGDLLAKHPTRVVENAITGMLPHTKLGRQIQKKLKVYAGPEHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MACCJ (50S ribosomal protein L13 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 43/124 (34.68%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA+G+ +GRL+S+VA++++GK KPT+ P+ D GD I++NA+ I ++G K ++K+YY H+ + G +K + E E++P + ++ MLP+ ++ G+EHP P Sbjct: 15 KWYVIDAEGKTMGRLSSEVASILRGKHKPTFTPHVDCGDHVILINAEKIYLSGNKAEDKIYYRHSNHPGGIKSISAGELREKNPVRLMETSIKGMLPKGSLGDKMFKKLHVYAGAEHPHTAQQP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HELPS (50S ribosomal protein L13 OS=Helicobacter pylori (strain Shi470) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DAK +V GRL +++A +++GK +P Y PN D GD +V+NA + +G KL++K Y+ H+GY G K +TL+E +E+ P + AV MLP+ ++ +HP Sbjct: 14 WVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HELPJ (50S ribosomal protein L13 OS=Helicobacter pylori J99 GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DAK +V GRL +++A +++GK +P Y PN D GD +V+NA + +G KL++K Y+ H+GY G K +TL+E +E+ P + AV MLP+ ++ +HP Sbjct: 14 WVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHP 130 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |