EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HELPH (50S ribosomal protein L13 OS=Helicobacter pylori (strain HPAG1) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DAK +V GRL +++A +++GK +P Y PN D GD +V+NA + +G KL++K Y+ H+GY G K +TL+E +E+ P + AV MLP+ ++ +HP Sbjct: 14 WVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HELPG (50S ribosomal protein L13 OS=Helicobacter pylori (strain G27) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DAK +V GRL +++A +++GK +P Y PN D GD +V+NA + +G KL++K Y+ H+GY G K +TL+E +E+ P + AV MLP+ ++ +HP Sbjct: 14 WVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HELAH (50S ribosomal protein L13 OS=Helicobacter acinonychis (strain Sheeba) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DAK +V GRL +++A +++GK +P Y PN D GD +V+NA + +G KL++K Y+ H+GY G K +TL+E +E+ P + AV MLP+ ++ +HP Sbjct: 14 WVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HAHCH (50S ribosomal protein L13 OS=Hahella chejuensis (strain KCTC 2396) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA + LGRL++++A ++GK K Y P+ D GD +V+NA+ + VTG K ++K+YY HTGY G LKE + + ++ P I AV M+PRN ++ +EHP P Sbjct: 15 WYVIDATDKTLGRLSTEIARRLRGKHKAEYTPHVDTGDYIVVVNAEKVRVTGNKAQDKMYYRHTGYPGGLKEMSFDKLIQHAPERVIETAVKGMMPRNPLGRAMLKKLKVYASAEHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BUCBP (50S ribosomal protein L13 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W DA G++LGRLA+ +A+ ++GK K Y P+ D GD IV+NAK+I VTG+K +K YY HTGY+G LK+ K+ + R P I AV MLP+ ++ H Sbjct: 17 WYCIDATGKILGRLATNIASRLRGKHKVEYTPHVDIGDYLIVINAKNIKVTGKKCTDKFYYHHTGYVGGLKKIAFKDMLHRYPERIIEIAVRGMLPKGPLGRSMFKKLKVYANDNH 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ARCB4 (50S ribosomal protein L13 OS=Arcobacter butzleri (strain RM4018) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 43/117 (36.75%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +V GR+ ++VAT+++GK+KP + PN D GD +++NA +G+KL++K Y+ H+GY G K + E E++P + + A MLP+ ++ GSEHP Sbjct: 16 WIVVDATDKVFGRIITEVATILRGKNKPCFTPNVDCGDFVVIINASKAKFSGKKLESKNYFTHSGYFGSTKTHKMSEMFEKNPEKLYKLATRGMLPKTTLGKEMLKKLKVYAGSEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIAD (50S ribosomal protein L13 OS=Acinetobacter sp. (strain ADP1) GN=rplM PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA G+ LGRLA+++A ++GK K +Y P+ D GD +V+NA+ + VTG+K +K YY HTG+ G ++E ++ + P + KAV MLP+ ++ G+EHP Sbjct: 15 WYVVDASGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIVVINAEQVQVTGKKSLDKKYYRHTGFPGGIRETNFEKLIAHKPEAVLEKAVKGMLPKGPLGYAMIKKMKVYAGTEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAW (50S ribosomal protein L13 OS=Staphylococcus aureus (strain MW2) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD IV+NA I TG K +KVYY H+ + G +K T E +P I ++ MLP ++ G+EHP Sbjct: 15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAT (50S ribosomal protein L13 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD IV+NA I TG K +KVYY H+ + G +K T E +P I ++ MLP ++ G+EHP Sbjct: 15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAS (50S ribosomal protein L13 OS=Staphylococcus aureus (strain MSSA476) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD IV+NA I TG K +KVYY H+ + G +K T E +P I ++ MLP ++ G+EHP Sbjct: 15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |