EY744219

Overview
NameEY744219
Unique NameEY744219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAR (50S ribosomal protein L13 OS=Staphylococcus aureus (strain MRSA252) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAN (50S ribosomal protein L13 OS=Staphylococcus aureus (strain N315) GN=rplM PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAM (50S ribosomal protein L13 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rplM PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAE (50S ribosomal protein L13 OS=Staphylococcus aureus (strain Newman) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAC (50S ribosomal protein L13 OS=Staphylococcus aureus (strain COL) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAAB (50S ribosomal protein L13 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAA9 (50S ribosomal protein L13 OS=Staphylococcus aureus (strain JH9) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAA8 (50S ribosomal protein L13 OS=Staphylococcus aureus (strain NCTC 8325) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAA3 (50S ribosomal protein L13 OS=Staphylococcus aureus (strain USA300) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAA2 (50S ribosomal protein L13 OS=Staphylococcus aureus (strain JH1) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD  IV+NA  I  TG K  +KVYY H+ + G +K  T  E    +P   I  ++  MLP             ++ G+EHP
Sbjct:   15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL13_STAAR1.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAAN1.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAAM1.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAAE1.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAAC1.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAAB1.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAA91.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAA81.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAA31.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]
RL13_STAA21.687e-1940.6850S ribosomal protein L13 OS=Staphylococcus aureus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bp
ATAAACCATACTCTTAGGGTTTACGCAGGGCCATCTCTAACTTTTGTTAT
TATTATTATTTGAATGTCCTTTACTTTTGATTTTGGGTTGTAATTTGAAT
ATAGCTCTGAATTTGATTTGCGTTACTCATTTTTGTTTAAAAGAAGTTAT
AACAGAGCAATAGAAAAATGGCAAACCAAGCAGCCACAGCTTTCAGTGGC
AACATGAAGAAAGCGCTTGCTGGGCTGAGGCGAATCAATCTAGAAGGTCT
ACGATGGAGAGTTTTTGATGCTAAAGGCCAGGTCCTTGGGAGATTAGCAT
CTCAGGTAGCTACTGTCGTTCAAGGCAAGGATAAGCCTACGTACGCTCCT
AATCGTGATGATGGTGATATGTGCATTGTGCTTAATGCAAAAGATATATG
TGTTACTGGGAGGAAACTTAAAAATAAGGTTTACTACTGGCATACCGGGT
ATATAGGCCACCTCAAGGAAAGGACCTTAAAAGAACAGATGGAGAGGGAC
CCTACAGAAGCCATTCGTAAAGCTGTCTTACGCATGCTTCCAAGAAATAA
ATTACGTGATGATAGAGATCGAAAACTGAGGATTTTTCCTGGAAGCGAGC
ACCCTTTTTGGCGACCGGCCCCCTGAACCATACGTGATGCCTCCTCGACG
TGGTAGAGAACTGCGACCTCGGGTTAGAAGAGCCATGATTAAAAGAACAA
AAAAAGGCGGAAAAGCAGCCAAATAACCAGGGATTGAGGAAAAACAAAAA
GAAAAAATTTGAAAACAAAATGGCTGGCCTGAAAATTTTGGTGGGGGCCC
CTTTTGGTTTTGAAAAGGGA
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