EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STAA1 (50S ribosomal protein L13 OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+GQ LGRL+S+VA++++GK+K TY P+ D GD IV+NA I TG K +KVYY H+ + G +K T E +P I ++ MLP ++ G+EHP Sbjct: 15 KWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RICTY (50S ribosomal protein L13 OS=Rickettsia typhi GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKN---KVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIRDASS 647 +W V DAK VLGRLAS+VA +++GK KP++ P+ D GD I++NA+ I +TG+KL + KVYY HTG+ G +K+ T + + + P I+ AV RM+ RN ++ EHP P T+ D +S Sbjct: 14 KWWVIDAKNIVLGRLASRVAIMLRGKHKPSFTPHLDCGDNIIIINAEHIKLTGKKLNHKDGKVYYRHTGFPGGIKDTTAGKILSGKYPERVIKMAVKRMITRNVLGAKQMSNLYVYANCEHPHMAQQP-TVYDFAS 148
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RICBR (50S ribosomal protein L13 OS=Rickettsia bellii (strain RML369-C) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLK---NKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DAK VLGRLAS+VA +++GK KP++ P+ D GD I++NA+ + +TG+K K+YY HTG+ G +K+ T + + + P I+ AV RM+ RN I+ SEHP Sbjct: 14 KWWVIDAKNVVLGRLASRVANMLRGKHKPSFTPHMDCGDNIIIINAEHVTLTGKKANPKDGKIYYRHTGFPGGIKDTTAGKILSGKHPERVIKMAVKRMITRNALGAKQMSNLYIYANSEHP 135
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RICB8 (50S ribosomal protein L13 OS=Rickettsia bellii (strain OSU 85-389) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLK---NKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DAK VLGRLAS+VA +++GK KP++ P+ D GD I++NA+ + +TG+K K+YY HTG+ G +K+ T + + + P I+ AV RM+ RN I+ SEHP Sbjct: 14 KWWVIDAKNVVLGRLASRVANMLRGKHKPSFTPHMDCGDNIIIINAEHVTLTGKKANPKDGKIYYRHTGFPGGIKDTTAGKILSGKHPERVIKMAVKRMITRNALGAKQMSNLYIYANSEHP 135
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HELPY (50S ribosomal protein L13 OS=Helicobacter pylori GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DAK +V GRL +++A +++GK +P Y PN D GD +V+NA + +G KL++K Y+ H+GY G K +TL+E +E+ P + AV MLP+ ++ +HP Sbjct: 14 WVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKAPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HELP2 (50S ribosomal protein L13 OS=Helicobacter pylori (strain P12) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DAK +V GRL +++A +++GK +P Y PN D GD +V+NA + +G KL++K Y+ H+GY G K +TL+E +E+ P + AV MLP+ ++ +HP Sbjct: 14 WVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKAPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHP 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DEIRA (50S ribosomal protein L13 OS=Deinococcus radiodurans GN=rplM PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA G LGRLA+ +A+ ++GK +P + PN GD +V+NA + +TG+KL +KVY +TGY G LK T +E + + P I AV MLP+ ++ G HP Sbjct: 41 WVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKVYTRYTGYQGGLKTETAREALSKHPERVIEHAVFGMLPKGRQGRAMHTRLKVYAGETHP 157
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CLOK5 (50S ribosomal protein L13 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA G+ LGR+ASQVA+V++GK KP + P+ D GD IV+N++ + +TG+KL K+ H+ Y G LKE +E + + P ++AV RMLP+ ++ G+EH Sbjct: 14 KWYVVDAAGKPLGRVASQVASVLRGKHKPIFTPHVDTGDFVIVINSEKVLLTGKKLDQKMLRHHSLYPGGLKETPYREALNKKPEFVFQEAVRRMLPKGVLGRKMLKKLKVYRGTEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CLOK1 (50S ribosomal protein L13 OS=Clostridium kluyveri (strain NBRC 12016) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA G+ LGR+ASQVA+V++GK KP + P+ D GD IV+N++ + +TG+KL K+ H+ Y G LKE +E + + P ++AV RMLP+ ++ G+EH Sbjct: 14 KWYVVDAAGKPLGRVASQVASVLRGKHKPIFTPHVDTGDFVIVINSEKVLLTGKKLDQKMLRHHSLYPGGLKETPYREALNKKPEFVFQEAVRRMLPKGVLGRKMLKKLKVYRGTEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CHLCH (50S ribosomal protein L13 OS=Chlorobium chlorochromatii (strain CaD3) GN=rplM PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA+G VLGR+AS++A V++GK KP + P+ D GD +V NA+ + +TGRK + K Y+ H+ Y G ++ +K+ + P I AV MLP N ++ G+ HP +P Sbjct: 21 WYVIDAEGLVLGRMASEIAKVLRGKHKPQFTPHIDTGDFIVVTNAEKVLLTGRKSEQKTYFTHSHYPGGVRIDEVKDVIRTKPERVIENAVWGMLPHNNLGRQLFRKLKVYAGTNHPHASQSP 143 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |