EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BLOPB (50S ribosomal protein L13 OS=Blochmannia pennsylvanicus (strain BPEN) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W + DAK ++LGRL++ ++ + GK K YAP+ D GD IVLNAK++ V+G K +K+YY HTGYIG +K+ K + R P + I AV MLP+ ++ G+ H Sbjct: 15 WYIIDAKHKILGRLSTVISRYLIGKHKIEYAPHVDIGDYVIVLNAKEVSVSGHKRDDKIYYHHTGYIGGIKQLNFKRMINRYPEKVIEIAVKGMLPKGPLGRMMYCRLRVYSGNVH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BIFAA (50S ribosomal protein L13 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rplM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19 Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPF 608 W V DA VLGRLA+Q AT+++GK+KPTYAP+ D G+ I+LNA I +TG KL K Y H+G G L+ + + ++ +P I+ A+ MLP+N I G+EHP+ Sbjct: 15 WYVIDATDVVLGRLATQAATLLRGKNKPTYAPHADSGNHVIILNADKIALTGNKL-GKELYMHSGRPGGLRRDSYAQLLKTNPERIIKSAIKGMLPKNRLAKVQLDRLHIVRGAEHPY 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THEEB (50S ribosomal protein L13 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplM PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPF--WRPAP*TI 632 +W V DA Q LGRLA+++A +++GK+K Y P+ D GD IV+NA+ + VTG+K K+Y H+G G +K T + R P I AV MLP+N ++ G EHP +P P TI Sbjct: 18 QWYVIDAADQRLGRLAAEIARILRGKNKAIYTPHMDTGDFVIVINAEKVTVTGKKRSQKLYRRHSGRPGGMKIETFDQLQARIPERIIEHAVKGMLPKNSLGRKLFTKLKVYAGPEHPHQAQKPQPLTI 146
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SHEB8 (50S ribosomal protein L13 OS=Shewanella baltica (strain OS185) GN=rplM PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA G+ LGR+A+++A ++GK KP Y P+ D GD IV+NA+ + VTG K K K YY H+G+ G +K+ + ++ + P I KAV MLP+ ++ G+EH Sbjct: 15 WFVVDADGKTLGRIATEIAIRLRGKHKPEYTPHVDTGDYIIVVNAEKVTVTGNKAKGKTYYSHSGFPGGIKQISFEKLQAQKPEMIIEKAVKGMLPKGPLGRAMFRKLKVYAGAEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_NITMU (50S ribosomal protein L13 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=rplM PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 52/134 (38.81%), Postives = 74/134 (55.22%), Query Frame = 3 Query: 204 MKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 MK A +N E W V DA G+VLGRLA+++A ++GK KP Y P+ D GD +V+N + VTG K ++K+YY H+GY G + E + + R P + KAV MLP+ I+ G+ HP Sbjct: 1 MKTFSAKPHEVNRE---WFVIDAAGKVLGRLAAEIAHRLRGKHKPIYTPHVDTGDFIVVINVDKMRVTGNKAESKMYYRHSGYPGGIYETSFAKMHARFPGRPLEKAVKGMLPKGPLGYAMLKKLKIYAGAAHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_NITEC (50S ribosomal protein L13 OS=Nitrosomonas eutropha (strain C91) GN=rplM PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGRLA+ +A ++GK KP Y P+ D GD +V+N + VTG K ++K+YY H+GY G L E T K+ R P + KAV MLP+ I+ G HP Sbjct: 15 WFVVDATDKVLGRLAAAIAHRLRGKHKPIYTPHVDTGDYIVVINVDKLRVTGNKAEDKIYYRHSGYPGGLYETTFKKMHARFPARPLEKAVKGMLPKGPLGYAMIKKLKIYAGDIHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCHJ (50S ribosomal protein L13 OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=rplM PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+ ++LGRLA+ VA+ ++GK P + PN D GD I++NA+ I +T +K + K+YY H+GY G L+ RT +E + P + +A+ M+P ++ GSEHP Sbjct: 15 KWFVIDAESKILGRLAAFVASRLRGKHYPHFTPNVDMGDKIIIINAEKILLTAKKEEQKLYYNHSGYPGGLRVRTAREMRAKKPIALLERAIYGMIPHTKLGDKQRKNLYVYSGSEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCH7 (50S ribosomal protein L13 OS=Mycoplasma hyopneumoniae (strain 7448) GN=rplM PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+ ++LGRLA+ VA+ ++GK P + PN D GD I++NA+ I +T +K + K+YY H+GY G L+ RT +E + P + +A+ M+P ++ GSEHP Sbjct: 15 KWFVIDAESKILGRLAAFVASRLRGKHYPHFTPNVDMGDKIIIINAEKILLTAKKEEQKLYYNHSGYPGGLRVRTAREMRAKKPIALLERAIYGMIPHTKLGDKQRKNLYVYSGSEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CORDI (50S ribosomal protein L13 OS=Corynebacterium diphtheriae GN=rplM PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*T 629 +W V DA VLGRLA+ A +++GK KP +APN D GD IV+NA + V+ K + ++ Y H+GY G LK TL +E P + +++ M+P N +F GSEHP+ P T Sbjct: 14 KWYVIDATDVVLGRLATHAADLLRGKGKPQFAPNVDCGDHVIVINADKVHVSSNKREREMRYRHSGYPGGLKTMTLGRSLEVHPERVVEESIRGMMPHNRLSRASVKKLHVFAGSEHPYAAQKPET 139
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CHLPD (50S ribosomal protein L13 OS=Chlorobium phaeobacteroides (strain DSM 266) GN=rplM PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA GQVLGR+A+++A V++GK KP + P+ D GD +V NA I ++G+K + K Y+ H+ Y G +K +K+ +++ P + I AV MLP N ++ G EHP Sbjct: 21 WYVIDADGQVLGRMAAEIARVLRGKHKPQFTPHIDTGDFIVVTNAAKIGLSGKKTEQKSYFSHSNYPGGVKFDHVKDLLKKKPEKIIEHAVWGMLPHNNLGRQLFKKLKVYAGPEHP 137 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |