EY744219

Overview
NameEY744219
Unique NameEY744219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIBY (50S ribosomal protein L13 OS=Acinetobacter baumannii (strain AYE) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            W V DA G+ LGRLA+++A  ++GK K +Y P+ D GD  IV+NA+ + VTG K  +K YY HT + G LKE   ++ +   P E   +AV  MLP+            ++ GSEHP
Sbjct:   15 WFVVDATGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIIVINAEQVQVTGNKALDKKYYRHTEFPGGLKETNFEKLVAHKPEEIFERAVKGMLPKGPLGYAMIKKMKVYAGSEHP 131          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIBT (50S ribosomal protein L13 OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            W V DA G+ LGRLA+++A  ++GK K +Y P+ D GD  IV+NA+ + VTG K  +K YY HT + G LKE   ++ +   P E   +AV  MLP+            ++ GSEHP
Sbjct:   15 WFVVDATGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIIVINAEQVQVTGNKALDKKYYRHTEFPGGLKETNFEKLVAHKPEEIFERAVKGMLPKGPLGYAMIKKMKVYAGSEHP 131          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIBS (50S ribosomal protein L13 OS=Acinetobacter baumannii (strain SDF) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            W V DA G+ LGRLA+++A  ++GK K +Y P+ D GD  IV+NA+ + VTG K  +K YY HT + G LKE   ++ +   P E   +AV  MLP+            ++ GSEHP
Sbjct:   15 WFVVDATGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIIVINAEQVQVTGNKALDKKYYRHTEFPGGLKETNFEKLVAHKPEEIFERAVKGMLPKGPLGYAMIKKMKVYAGSEHP 131          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIBC (50S ribosomal protein L13 OS=Acinetobacter baumannii (strain ACICU) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            W V DA G+ LGRLA+++A  ++GK K +Y P+ D GD  IV+NA+ + VTG K  +K YY HT + G LKE   ++ +   P E   +AV  MLP+            ++ GSEHP
Sbjct:   15 WFVVDATGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIIVINAEQVQVTGNKALDKKYYRHTEFPGGLKETNFEKLVAHKPEEIFERAVKGMLPKGPLGYAMIKKMKVYAGSEHP 131          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIB5 (50S ribosomal protein L13 OS=Acinetobacter baumannii (strain AB0057) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            W V DA G+ LGRLA+++A  ++GK K +Y P+ D GD  IV+NA+ + VTG K  +K YY HT + G LKE   ++ +   P E   +AV  MLP+            ++ GSEHP
Sbjct:   15 WFVVDATGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIIVINAEQVQVTGNKALDKKYYRHTEFPGGLKETNFEKLVAHKPEEIFERAVKGMLPKGPLGYAMIKKMKVYAGSEHP 131          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIB3 (50S ribosomal protein L13 OS=Acinetobacter baumannii (strain AB307-0294) GN=rplM PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605
            W V DA G+ LGRLA+++A  ++GK K +Y P+ D GD  IV+NA+ + VTG K  +K YY HT + G LKE   ++ +   P E   +AV  MLP+            ++ GSEHP
Sbjct:   15 WFVVDATGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIIVINAEQVQVTGNKALDKKYYRHTEFPGGLKETNFEKLVAHKPEEIFERAVKGMLPKGPLGYAMIKKMKVYAGSEHP 131          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_VIBSL (50S ribosomal protein L13 OS=Vibrio splendidus (strain LGP32) GN=rplM PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19
Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602
            W V DA+G+ LGRLAS++A+ ++GK K  Y P+ D GD  IV+NA+ + VTG K K KVYY H+ + G LK  T ++ + + P   +  AV  MLPR            ++ G+EH
Sbjct:   15 WYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTGDYIIVVNAEKVAVTGNKAKGKVYYRHSEFPGGLKTITFEKLIAKKPEMVLELAVKGMLPRGPLGRAMYRKLKVYAGTEH 130          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_VIBCM (50S ribosomal protein L13 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rplM PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19
Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602
            W V DA+G+ LGRLAS++A+ ++GK K  Y P+ D GD  IV+NA+ + VTG K KNK+Y+ H+ + G LK  + ++ +ER P   +  AV  MLP+            ++ G+EH
Sbjct:   15 WYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTGDYIIVVNAEKVTVTGNKAKNKMYHRHSEFPGGLKSFSFEKLIERKPEMVLELAVKGMLPKGPLGRAMYRKLKVYAGAEH 130          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_VIBCH (50S ribosomal protein L13 OS=Vibrio cholerae GN=rplM PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19
Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602
            W V DA+G+ LGRLAS++A+ ++GK K  Y P+ D GD  IV+NA+ + VTG K KNK+Y+ H+ + G LK  + ++ +ER P   +  AV  MLP+            ++ G+EH
Sbjct:   15 WYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTGDYIIVVNAEKVTVTGNKAKNKMYHRHSEFPGGLKSFSFEKLIERKPEMVLELAVKGMLPKGPLGRAMYRKLKVYAGAEH 130          
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_VIBC3 (50S ribosomal protein L13 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rplM PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19
Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602
            W V DA+G+ LGRLAS++A+ ++GK K  Y P+ D GD  IV+NA+ + VTG K KNK+Y+ H+ + G LK  + ++ +ER P   +  AV  MLP+            ++ G+EH
Sbjct:   15 WYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTGDYIIVVNAEKVTVTGNKAKNKMYHRHSEFPGGLKSFSFEKLIERKPEMVLELAVKGMLPKGPLGRAMYRKLKVYAGAEH 130          
The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL13_ACIBY2.203e-1941.0350S ribosomal protein L13 OS=Acinetobacter baumann... [more]
RL13_ACIBT2.203e-1941.0350S ribosomal protein L13 OS=Acinetobacter baumann... [more]
RL13_ACIBS2.203e-1941.0350S ribosomal protein L13 OS=Acinetobacter baumann... [more]
RL13_ACIBC2.203e-1941.0350S ribosomal protein L13 OS=Acinetobacter baumann... [more]
RL13_ACIB52.203e-1941.0350S ribosomal protein L13 OS=Acinetobacter baumann... [more]
RL13_ACIB32.203e-1941.0350S ribosomal protein L13 OS=Acinetobacter baumann... [more]
RL13_VIBSL2.877e-1941.3850S ribosomal protein L13 OS=Vibrio splendidus (st... [more]
RL13_VIBCM2.877e-1940.5250S ribosomal protein L13 OS=Vibrio cholerae serot... [more]
RL13_VIBCH2.877e-1940.5250S ribosomal protein L13 OS=Vibrio cholerae GN=rp... [more]
RL13_VIBC32.877e-1940.5250S ribosomal protein L13 OS=Vibrio cholerae serot... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bp
ATAAACCATACTCTTAGGGTTTACGCAGGGCCATCTCTAACTTTTGTTAT
TATTATTATTTGAATGTCCTTTACTTTTGATTTTGGGTTGTAATTTGAAT
ATAGCTCTGAATTTGATTTGCGTTACTCATTTTTGTTTAAAAGAAGTTAT
AACAGAGCAATAGAAAAATGGCAAACCAAGCAGCCACAGCTTTCAGTGGC
AACATGAAGAAAGCGCTTGCTGGGCTGAGGCGAATCAATCTAGAAGGTCT
ACGATGGAGAGTTTTTGATGCTAAAGGCCAGGTCCTTGGGAGATTAGCAT
CTCAGGTAGCTACTGTCGTTCAAGGCAAGGATAAGCCTACGTACGCTCCT
AATCGTGATGATGGTGATATGTGCATTGTGCTTAATGCAAAAGATATATG
TGTTACTGGGAGGAAACTTAAAAATAAGGTTTACTACTGGCATACCGGGT
ATATAGGCCACCTCAAGGAAAGGACCTTAAAAGAACAGATGGAGAGGGAC
CCTACAGAAGCCATTCGTAAAGCTGTCTTACGCATGCTTCCAAGAAATAA
ATTACGTGATGATAGAGATCGAAAACTGAGGATTTTTCCTGGAAGCGAGC
ACCCTTTTTGGCGACCGGCCCCCTGAACCATACGTGATGCCTCCTCGACG
TGGTAGAGAACTGCGACCTCGGGTTAGAAGAGCCATGATTAAAAGAACAA
AAAAAGGCGGAAAAGCAGCCAAATAACCAGGGATTGAGGAAAAACAAAAA
GAAAAAATTTGAAAACAAAATGGCTGGCCTGAAAATTTTGGTGGGGGCCC
CTTTTGGTTTTGAAAAGGGA
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