EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_TREDE (50S ribosomal protein L13 OS=Treponema denticola GN=rplM PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W + DA G+ LGR+A++ A +++GK K ++AP+++ GD +++NA+ + VTG K K+K+YY H+GY+G LK + + P E + A+ MLP+ ++ G EHP Sbjct: 15 WYLIDAAGKPLGRVAAKTAAMLRGKHKVSFAPHQEIGDYVVIINAEKVAVTGNKAKDKMYYTHSGYVGGLKSINFNGLIAKKPAEPLMIAIKGMLPKGPLGRKLLTNVKVYAGPEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCMO (50S ribosomal protein L13 OS=Mycoplasma mobile GN=rplM PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA+GQVLGRLAS VA+ ++GK+KPT+ PN D GD IV+NA + +T +K +K+YY +GY G LK ++ + P + KAV M+P ++ G EH Sbjct: 15 KWFVVDAEGQVLGRLASVVASYLRGKNKPTFTPNVDMGDNIIVINADKVVLTAKKEDDKIYYSSSGYNGGLKAINARDLRAKKPFALVEKAVKGMIPHTKLGRKQFGNLYVYAGREH 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DEIDV (50S ribosomal protein L13 OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=rplM PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 48/126 (38.10%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TI 632 W V DA G LGRLA+ +A+ ++GK +P + PN GD +VLNA+ + +TG KL KVY +TGY G L+ T +E + + P I AV MLP+ ++ G HP P T+ Sbjct: 13 WVVVDAAGVPLGRLATLIASRIRGKHRPDFTPNLIQGDFVVVLNAEKVALTGNKLDGKVYTRYTGYQGGLRTETAREALAKHPERVIEHAVFGMLPKGRQGRSMHNRLKVYAGETHPHTAQKPQTL 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_WOLTR (50S ribosomal protein L13 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 54/132 (40.91%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIRDAS 644 +W V +A+G V+GRLA+ VAT+++GK KP Y P+ D GD I++NA+ + TG+K K KVYY HTGY G LK+ T + + P I+ AV RML ++ G EH P I AS Sbjct: 14 KWFVINAEGLVVGRLAAFVATLLRGKHKPEYTPHMDCGDNIIIINAEKVHFTGKKFKEKVYYKHTGYPGGLKKTTPNNVLNGKFPERVIKMAVKRMLDDGPMARKRFGNLYVYSGPEHKHQGQQPKKIDFAS 145
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THET8 (50S ribosomal protein L13 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=rplM PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 RW + DA+G+ LGRLA+++AT+++GK +P + PN GD +V+NA I VTG+KL+ K+Y ++GY G LK+ L++ + P + AV MLP+ ++ G +HP P Sbjct: 12 RWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPGGLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRP 135
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THET2 (50S ribosomal protein L13 OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=rplM PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 RW + DA+G+ LGRLA+++AT+++GK +P + PN GD +V+NA I VTG+KL+ K+Y ++GY G LK+ L++ + P + AV MLP+ ++ G +HP P Sbjct: 12 RWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPGGLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRP 135
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SYNFM (50S ribosomal protein L13 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+ QVLGRLAS++A ++GK P + P+ D GD +V+NA + +TG K K+YY H+GY+G +K ++ ++ +P + +R AV MLP+N ++ G+EHP Sbjct: 14 KWILVDAENQVLGRLASRIAMRLRGKHLPAFTPHVDLGDFVVVINADKVQLTGNKWDQKLYYRHSGYMGGVKVQSARKLNAGNPEKLLRLAVWGMLPKNRLGRKLIKKLKVYKGAEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STRAW (50S ribosomal protein L13 OS=Streptomyces avermitilis GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+ VLGRLA+ A +++GK KP YAP+ D GD I++NA + ++G K K+ Y H+GY G L+ E + ++P +A+ KA+ M+P+N ++ G +HP Sbjct: 14 QWYVIDAQDVVLGRLATTAANILRGKHKPIYAPHVDAGDFVIIINADKVHLSGNKKTQKLAYRHSGYPGGLRSVRYDELLAKNPEKAVEKAIKGMIPKNTLGRQVLSKLKVYSGDQHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHORT (50S ribosomal protein L13 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+G VLGRLA +A +++GK+K Y P+ D GD +V+NA+ + +TG K N+ ++WHTG+ G +K R+L + + P I KAV RM+PR ++ G HP Sbjct: 14 KWYVIDAEGVVLGRLAVIIADLLRGKNKTIYTPHIDTGDHVVVINAEKVHLTGNKAANERFFWHTGHPGGIKSRSLGQIRDGAHPERLIEKAVERMMPRGPLARAQFKKLRVYGGEAHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RALME (50S ribosomal protein L13 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGR+AS+VA ++GK KP + P+ D GD I++NA + VTG K ++K YY H+GY G + E T + +R P A+ KAV MLP+ ++ +EHP Sbjct: 15 WYVIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIIVNAAKLRVTGTKEQDKKYYRHSGYPGGIYETTFGKMQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEAEHP 131 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |