EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCH2 (50S ribosomal protein L13 OS=Mycoplasma hyopneumoniae (strain 232) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 45/118 (38.14%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+ ++LGRLA+ VA+ ++GK P + PN D GD I++NA+ I +T +K K+YY H+GY G L+ RT +E + P + +A+ M+P ++ GSEHP Sbjct: 15 KWFVIDAESKILGRLAAFVASRLRGKHYPHFTPNVDMGDKIIIINAEKILLTAKKEDQKLYYNHSGYPGGLRVRTAREMRAKKPIALLERAIYGMIPHTKLGDKQRKNLYVYSGSEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MICAN (50S ribosomal protein L13 OS=Microcystis aeruginosa (strain NIES-843) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 237 NLEGL--RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 NLE L +W V DA Q LGRLA+++A +++GK+K T+ P+ D GD IV+NA+ + VTG+K + KVY +G G +K + + +R P I AV MLP+N ++ G+EHP P Sbjct: 8 NLETLEQKWYVIDAADQRLGRLATEIAMILRGKNKATFTPHLDTGDFVIVINAEKVTVTGKKRQQKVYRRDSGRPGGMKVESFDKLQKRIPERIIEHAVKGMLPKNSLGRKLFTKLKVYAGAEHPHQAQQP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CLOAB (50S ribosomal protein L13 OS=Clostridium acetobutylicum GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V D G+ LGR ASQ+A++++GK+KP Y PN D GD IVLNA+ + +TG+K K++ HT Y G LKE + K+ + + +AV RMLP ++ G EH Sbjct: 14 KWYVIDVAGKPLGRAASQIASILRGKNKPIYTPNVDTGDYVIVLNAEKVLLTGKKADQKMFRHHTLYPGGLKEMSYKDAIAKKADFVFYEAVRRMLPSGVLGRKMIKKLKVYKGEEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_CHRSD (50S ribosomal protein L13 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA + LGRLA+++A ++GK KP Y P+ D GD +V+NA+ + VTG K + K YY HTGY G L+ + ++ ++ P I AV MLP+ ++ G+EHP Sbjct: 15 WYVVDATDKTLGRLATEIARRLRGKHKPEYTPHVDTGDYIVVVNAEKVRVTGNKAQAKNYYRHTGYPGGLRSMSFEKLIDHAPERVIESAVKGMLPKGPLGRAMYSKLKVYAGAEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BURTA (50S ribosomal protein L13 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=rplM PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGR+AS+VA ++GK KP + P+ D GD IV+NA + VTG K +K YY H+GY G + E T + ER P A+ KAV MLP+ ++ + HP Sbjct: 15 WYVIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIVINASKLKVTGNKTLDKKYYRHSGYPGGIYETTFGKMQERFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEATHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BURPS (50S ribosomal protein L13 OS=Burkholderia pseudomallei GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGR+AS+VA ++GK KP + P+ D GD IV+NA + VTG K +K YY H+GY G + E T + ER P A+ KAV MLP+ ++ + HP Sbjct: 15 WYVIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIVINASKLKVTGNKTLDKKYYRHSGYPGGIYETTFGKMQERFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEATHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BURP6 (50S ribosomal protein L13 OS=Burkholderia pseudomallei (strain 668) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGR+AS+VA ++GK KP + P+ D GD IV+NA + VTG K +K YY H+GY G + E T + ER P A+ KAV MLP+ ++ + HP Sbjct: 15 WYVIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIVINASKLKVTGNKTLDKKYYRHSGYPGGIYETTFGKMQERFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEATHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BURP1 (50S ribosomal protein L13 OS=Burkholderia pseudomallei (strain 1710b) GN=rplM PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGR+AS+VA ++GK KP + P+ D GD IV+NA + VTG K +K YY H+GY G + E T + ER P A+ KAV MLP+ ++ + HP Sbjct: 15 WYVIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIVINASKLKVTGNKTLDKKYYRHSGYPGGIYETTFGKMQERFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEATHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BURP0 (50S ribosomal protein L13 OS=Burkholderia pseudomallei (strain 1106a) GN=rplM PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGR+AS+VA ++GK KP + P+ D GD IV+NA + VTG K +K YY H+GY G + E T + ER P A+ KAV MLP+ ++ + HP Sbjct: 15 WYVIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIVINASKLKVTGNKTLDKKYYRHSGYPGGIYETTFGKMQERFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEATHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_SYNPX (50S ribosomal protein L13 OS=Synechococcus sp. (strain WH8102) GN=rplM PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19 Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPF--WRPAP*TIRDASS 647 +W + DA+ + LGRLA++VA V++GK+ P++ P+ D GD +V+NA+ I V+G K K+Y H+G G +K T + +R P + KA+ MLP N ++ GSEHP +P P + ++S Sbjct: 15 QWYLVDAENKTLGRLATEVAAVLRGKNNPSFTPHLDTGDFVVVVNAEKIRVSGSKPTQKLYRRHSGRPGGMKTETFEALQDRIPERIVEKAIKGMLPHNALGRQMFRKLKVYKGSEHPHAAQKPQPLQLNPSAS 148 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |