EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACAA (50S ribosomal protein L13 OS=Bacillus anthracis (strain A0248) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP P Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_PELPD (50S ribosomal protein L13 OS=Pelobacter propionicus (strain DSM 2379) GN=rplM PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23 Identity = 57/134 (42.54%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 204 MKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 MK +A + + + W + DA+ VLGRLASQ+A +++GK+K Y P+ D GD IV+NA+ I +TGRKL +K YY H+G+ G LKE + + +E+ P E I++AV MLP+N I+ GS HP Sbjct: 1 MKTEVAKIENVKRD---WYLVDAQEMVLGRLASQIANILRGKNKAIYTPSVDTGDFVIVVNAEKIALTGRKLADKSYYSHSGFPGGLKEISAGKLLEKKPEELIKRAVKGMLPKNKLSRHMLKKLKIYAGSSHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCLE (50S ribosomal protein L13 OS=Mycobacterium leprae GN=rplM PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23 Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPF--WRPAP*TIRDAS 644 W V DA VLGRLA+ AT+++GK KPT+APN D GD IV+NA + ++G K+++K+ Y H+GY G L++RT+ E M++ P + KA++ MLP+N ++ G +HP +P P I+ + Sbjct: 15 WYVIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYRHSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLPKNKLSRQIQRKLRVYAGPDHPHSAQQPVPFEIKQVA 146
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCLB (50S ribosomal protein L13 OS=Mycobacterium leprae (strain Br4923) GN=rplM PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23 Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPF--WRPAP*TIRDAS 644 W V DA VLGRLA+ AT+++GK KPT+APN D GD IV+NA + ++G K+++K+ Y H+GY G L++RT+ E M++ P + KA++ MLP+N ++ G +HP +P P I+ + Sbjct: 15 WYVIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYRHSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLPKNKLSRQIQRKLRVYAGPDHPHSAQQPVPFEIKQVA 146
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DESAD (50S ribosomal protein L13 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplM PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23 Identity = 56/123 (45.53%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA+ VLGRLA+Q+A ++GKDK + P+ D GD +VLNA I VTG K+ K YY HT + G LKERTLK +E+ P I AV MLP+N ++ G+EHP P Sbjct: 15 WFVVDAENMVLGRLATQIANKLRGKDKAMFTPHVDTGDFVVVLNADKIKVTGNKMDQKTYYKHTNHPGGLKERTLKVMLEKKPEVVIETAVRGMLPKNRLGKQMIKKLKVYAGTEHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BRAJA (50S ribosomal protein L13 OS=Bradyrhizobium japonicum GN=rplM PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23 Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DAKG V+GRLA+ VA ++GK PTY P+ D GD I++NA+ +TGRK + K YY HTGY+GH+KERT ++ +E + P + KAV RM+PR ++ G++HP Sbjct: 14 KWVLIDAKGLVVGRLATIVAMRLRGKHLPTYTPHVDCGDNVIIINAQHAVLTGRKREQKTYYKHTGYVGHVKERTARQILEGKHPERVLEKAVERMIPRGPLGRVQMGNLRVYGGADHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHOPB (50S ribosomal protein L13 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplM PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 55/119 (46.22%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA G V+GRLA+ VA ++GK PTY P+ D GD I++NA + +TGRK +NKVYY HTG+IG +KERT K +E R P + KA+ RM+PR ++ G +HP Sbjct: 14 KWIVIDATGLVVGRLATLVANRLRGKHLPTYTPHVDCGDHVIIVNAAKVVLTGRKRENKVYYHHTGFIGGIKERTAKSILEGRFPERVVEKAIERMIPRGPLGRMQMGNLRVYGGPDHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCS2 (50S ribosomal protein L13 OS=Mycobacterium smegmatis GN=rplM PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 53/117 (45.30%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLAS AT+++GK KPT+ PN D GD IV+NA I V+G KL K Y H+GY G L++RT+ E +E+ PT + A++ MLP N ++ G +HP Sbjct: 15 WYVIDASDVVLGRLASAAATLLRGKHKPTFTPNVDGGDFVIVINADKIAVSGDKLTKKFAYRHSGYPGGLRKRTIGELLEKHPTRVVENAIIGMLPHNKLGRQIQKKLKVYAGPDHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCMM (50S ribosomal protein L13 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=rplM PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + ++ KL+NK+ Y H+GY G L++R++ E ME+ P + KA++ MLP+N ++ G EHP P Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISNEKLRNKMAYSHSGYPGGLRKRSIGELMEKHPDRVVEKAIVGMLPKNKLSRQIQSKLRVYAGPEHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DESVV (50S ribosomal protein L13 OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=rplM PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA+ ++LGRLA+Q+A ++GK KP +AP+ D+GD +V+N + I VTG+KL K YY H+GY+G L+E +L++ + P E + KAV MLPRN ++ G+EHP Sbjct: 15 WFVVDAEDKILGRLATQIAHRLRGKHKPEFAPHMDNGDFIVVVNCEKIKVTGKKLDQKKYYNHSGYVGGLRETSLEKLLASKPEEVLLKAVRGMLPRNRLGRAMLTKLKVYRGTEHP 131 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |