EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DESVH (50S ribosomal protein L13 OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=rplM PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA+ ++LGRLA+Q+A ++GK KP +AP+ D+GD +V+N + I VTG+KL K YY H+GY+G L+E +L++ + P E + KAV MLPRN ++ G+EHP Sbjct: 15 WFVVDAEDKILGRLATQIAHRLRGKHKPEFAPHMDNGDFIVVVNCEKIKVTGKKLDQKKYYNHSGYVGGLRETSLEKLLASKPEEVLLKAVRGMLPRNRLGRAMLTKLKVYRGTEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHISN (50S ribosomal protein L13 OS=Rhizobium sp. (strain NGR234) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 54/119 (45.38%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLAS +A ++GK K T+ P+ DDGD IV+NA+ +TG+K +K YYWHTGY G +KERT ++ +E R P I KAV RM+PR ++ G+ HP Sbjct: 14 KWILIDAEGLVVGRLASIIANRLRGKHKATFTPHVDDGDNVIVINAEKAVLTGKKYTDKKYYWHTGYPGGIKERTARQIIEGRFPERVIEKAVERMVPRGPLGRRQMKNLRVYAGTNHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_METNO (50S ribosomal protein L13 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 60/128 (46.88%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TI 632 +W + DA+G V+GRLAS VA ++GK KP Y P+ D GD IV+NA + TGRK KVYY HTGY G +KER+ K +E R P + KAV RMLPR ++ GSEHP P T+ Sbjct: 14 KWVIIDAEGLVVGRLASIVAMRLRGKHKPQYTPHVDCGDNVIVINADKVKFTGRKYDQKVYYHHTGYPGGIKERSAKFILEGRFPERVVEKAVERMLPRGPLFRKILGNLRVYKGSEHPHAAQQPETL 141
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_HAEPS (50S ribosomal protein L13 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA G+ LGRLA+++A ++GK K Y P+ D GD IV+NA+ + VTG+K +K+YYWHTGY+G +K+ T KE + R P I AV MLP+ ++ G+EH Sbjct: 15 WYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINAEKVAVTGKKETDKIYYWHTGYVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_GEOSM (50S ribosomal protein L13 OS=Geobacter sp. (strain M21) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W + D +VLGR+A+++A V++GK+KPT+ P+ D GD IV+NA+ I +TGRKL +KVYY H+ Y G LKE T + +++ P E ++KAV MLP+N I+ G HP Sbjct: 15 WYLVDVDNKVLGRVATEIANVLRGKNKPTFTPSVDTGDFVIVVNAEKIALTGRKLADKVYYSHSSYPGGLKEITAGKLLDKKPEELLKKAVKGMLPKNKLARHMLKKLKIYSGGAHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_GEOLS (50S ribosomal protein L13 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 52/118 (44.07%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W V DA+ VLGRLA+QVA V++GK KP Y P+ D GD +++NA+ I +TG K+ +KVYY H+G+ G +K T + + P E IRKAV MLP+N ++ G HP Sbjct: 14 QWFVVDAENVVLGRLATQVANVLRGKHKPMYTPSVDTGDFVVIVNAEKIALTGNKMADKVYYSHSGFPGGIKSSTAAAMLSKKPEELIRKAVKGMLPKNKLARHMLKKLKVYSGGAHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DESDG (50S ribosomal protein L13 OS=Desulfovibrio desulfuricans (strain G20) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA+ ++LGRLA+Q+A ++GK KP +AP+ D+GD +V+N + I VTG+KL +K YY ++GY+G L+E+TL + P A+ AV MLPRN ++ GSEHP Sbjct: 15 WYVVDAEDKILGRLAAQIAHRLRGKHKPEFAPHVDNGDFIVVVNCEKIAVTGKKLSDKKYYRYSGYVGGLREQTLANVLATKPERALINAVKGMLPRNRLGRAMLKKLKVYAGSEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACTPJ (50S ribosomal protein L13 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA G+ LGRLA+++A ++GK K Y P+ D GD IV+NA+ + VTG+K +K+YYWHTGY+G +K+ T KE + R P I AV MLP+ ++ G+EH Sbjct: 15 WYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINAEKVAVTGKKETDKIYYWHTGYVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGREMFRKLKVYAGNEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACTP7 (50S ribosomal protein L13 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA G+ LGRLA+++A ++GK K Y P+ D GD IV+NA+ + VTG+K +K+YYWHTGY+G +K+ T KE + R P I AV MLP+ ++ G+EH Sbjct: 15 WYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINAEKVAVTGKKETDKIYYWHTGYVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGREMFRKLKVYAGNEH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACTP2 (50S ribosomal protein L13 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rplM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.925e-23 Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA G+ LGRLA+++A ++GK K Y P+ D GD IV+NA+ + VTG+K +K+YYWHTGY+G +K+ T KE + R P I AV MLP+ ++ G+EH Sbjct: 15 WYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINAEKVAVTGKKETDKIYYWHTGYVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGREMFRKLKVYAGNEH 130 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |