EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_EUBR3 (50S ribosomal protein L13 OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=rplM PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.284e-23 Identity = 54/127 (42.52%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TI 632 +W V DA+G+ LGRLAS+VA V++GK+K + P+ D GD IV+NA + VTG+KL K+YY H+ YIG +KE TL+E M + P I AV MLP+ ++ G +H P T+ Sbjct: 14 KWYVVDAEGKTLGRLASEVAKVLRGKNKAIFTPHIDTGDYVIVVNADKVKVTGKKLDQKIYYHHSDYIGGMKETTLREMMNKHPERVIEYAVKGMLPKGPLGRQMYTKLFVYAGPDHKHAAQKPETL 140
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BORA1 (50S ribosomal protein L13 OS=Bordetella avium (strain 197N) GN=rplM PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.284e-23 Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 W V DAKG+VLGR+AS+VA ++GK KP + P+ D GD +++NA DI VTG+K ++K Y+ HT Y G ++E ++ ER P AI+KAV MLP+ ++ G+EHP P Sbjct: 15 WFVIDAKGKVLGRVASEVARRLRGKHKPEFTPHVDTGDYIVIINAADIVVTGKKSQDKKYFRHTTYPGGIRETNFEKMQERFPGRAIQKAVKGMLPKGPLGYAMIKKLKVYAGAEHPHTAQQP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACHD (50S ribosomal protein L13 OS=Bacillus halodurans GN=rplM PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.284e-23 Identity = 51/117 (43.59%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 +W V DA+GQ LGRLAS+VA++++GK KPTY P+ D GD I++NA+ I +TG KL++K+YY H+G+ G LKE + P + + A+ MLP+N ++ GSEH Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKHKPTYTPHVDTGDHVIIINAEKIHLTGNKLQDKIYYRHSGHPGGLKETRAADMRANKPEKMLELAIKGMLPKNTLGRKQGMKLHVYAGSEH 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACCN (50S ribosomal protein L13 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplM PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.284e-23 Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA+GQ LGRLAS+VA++++GK KPT+ P+ D GD I++NA+ + +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP P Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKHKPTFTPHVDTGDHVIIINAEKVHLTGNKLNDKIYYRHTQHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQMSKKLNVYAGAEHPHQAQKP 138
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIF5 (50S ribosomal protein L13 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rplM PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.284e-23 Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGRL+ ++A ++GK KP Y P+ D GD +V+NA I VTG K K+K+YY HTGY+G+LK + ++ E P I AV MLP+N ++ GSEHP Sbjct: 15 WFVVDATDKVLGRLSVELAKRLRGKHKPEYTPHADTGDYIVVINADKIAVTGNKAKDKIYYHHTGYVGNLKSASFEKMKETHPERIIELAVKGMLPKNPLGRAMFKKLKVYTGSEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_ACIF2 (50S ribosomal protein L13 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rplM PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.284e-23 Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA +VLGRL+ ++A ++GK KP Y P+ D GD +V+NA I VTG K K+K+YY HTGY+G+LK + ++ E P I AV MLP+N ++ GSEHP Sbjct: 15 WFVVDATDKVLGRLSVELAKRLRGKHKPEYTPHADTGDYIVVINADKIAVTGNKAKDKIYYHHTGYVGNLKSASFEKMKETHPERIIELAVKGMLPKNPLGRAMFKKLKVYTGSEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THEFY (50S ribosomal protein L13 OS=Thermobifida fusca (strain YX) GN=rplM PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23 Identity = 55/124 (44.35%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA VLGRLAS+VAT+++GK KP YAP+ D GD IV+NA + +TG+KL+ K Y H+GY G L+ E M ++P A+ KAV MLP+N ++ G EHP P Sbjct: 14 QWHVIDASDVVLGRLASRVATLLRGKHKPYYAPHVDTGDYVIVVNADKVVLTGKKLEQKRAYRHSGYPGGLRSIPYSELMAKNPARAVEKAVKGMLPKNSLGRRMAKKLKVYAGPEHPHQAQKP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_STRMK (50S ribosomal protein L13 OS=Stenotrophomonas maltophilia (strain K279a) GN=rplM PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23 Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W + DA+G+ LGRLA+++A ++GK KP Y P+ D GD +V+NA+ I VTG+KL++K+Y+ TGYIG+LK +L + +ER P I AV MLP+ ++ G+EHP Sbjct: 15 WYLVDAEGKTLGRLATELARRLRGKHKPVYTPHVDTGDYLVVINAEKIAVTGKKLQDKMYHRFTGYIGNLKTESLAQALERHPERVIEIAVKGMLPKGPLGRQMYRKLKVYAGTEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_METS4 (50S ribosomal protein L13 OS=Methylobacterium sp. (strain 4-46) GN=rplM PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23 Identity = 59/128 (46.09%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TI 632 +W + DA+G V+GRLAS VA ++GK KP Y P+ D GD IV+NA + TGRK KVYY HTG+ G +KER+ K +E R P + KAV RMLPR ++ GSEHP P T+ Sbjct: 14 KWVIIDAEGLVVGRLASIVAMRLRGKHKPQYTPHVDCGDNVIVINADKVKFTGRKYDQKVYYHHTGFPGGIKERSAKYILEGRFPERVVEKAVERMLPRGPLFRRILGNLRVYKGSEHPHAAQQPETL 141
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_FRAP2 (50S ribosomal protein L13 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rplM PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23 Identity = 50/124 (40.32%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W + DA + LGRLAS+VA +++GK+KP Y P+ D GD +++NA+ + VTG K K K+Y+ HTGYIG +K + ++ + P AI KAV MLPR+ ++ G HP P Sbjct: 14 QWLLIDATDKTLGRLASEVAMILRGKNKPEYTPSMDTGDYVVIINAEKVAVTGNKRKGKIYHHHTGYIGGIKSISFEKLIATHPERAIEKAVKGMLPRSPLGRAMYKKLKVYAGENHPHTAQQP 137 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |