EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_AQUAE (50S ribosomal protein L13 OS=Aquifex aeolicus GN=rplM PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.428e-28 Identity = 62/124 (50.00%), Postives = 79/124 (63.71%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA G+ LGRLAS++A +++GK KP Y P+ D GD IV+NA+ I VTG+KL+ K YYWH+ Y G LKERTLK +E P E IR AV RMLP+N ++ G EHP P Sbjct: 14 KWWVVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKKYYWHSRYPGGLKERTLKWMLENKPEEVIRLAVKRMLPKNRLGHRMLKKLKVYRGPEHPHQAQKP 137
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THESQ (50S ribosomal protein L13 OS=Thermotoga sp. (strain RQ2) GN=rplM PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA G+VLGRLA+++A ++ GK KP Y P+ D GD IV+NA + +TG+KL KVYYWH+GY G LK T ++ +E+ P I AV RMLP+N ++ EHP P Sbjct: 21 KWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVLTGKKLDQKVYYWHSGYPGGLKSLTARQMLEKHPERLIWLAVKRMLPKNRKGRKMLKRLKVYASPEHPHQAQKP 144
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THEP1 (50S ribosomal protein L13 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplM PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA G+VLGRLA+++A ++ GK KP Y P+ D GD IV+NA + +TG+KL KVYYWH+GY G LK T ++ +E+ P I AV RMLP+N ++ EHP P Sbjct: 21 KWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVLTGKKLDQKVYYWHSGYPGGLKSLTARQMLEKHPERLIWLAVKRMLPKNRKGRKMLKRLKVYASPEHPHQAQKP 144
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_THEMA (50S ribosomal protein L13 OS=Thermotoga maritima GN=rplM PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA G+VLGRLA+++A ++ GK KP Y P+ D GD IV+NA + +TG+KL KVYYWH+GY G LK T ++ +E+ P I AV RMLP+N ++ EHP P Sbjct: 21 KWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVLTGKKLDQKVYYWHSGYPGGLKSLTARQMLEKHPERLIWLAVKRMLPKNRKGRKMLKRLKVYASPEHPHQAQKP 144
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MESSB (50S ribosomal protein L13 OS=Mesorhizobium sp. (strain BNC1) GN=rplM PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLA+ VA ++GK KPT+ P+ DDGD I++NA + TG+K ++K YYWHTGY G +KERT ++ +E R P + KAV RM+PR ++ GSEHP Sbjct: 14 KWVLIDAEGLVVGRLATIVANRLRGKHKPTFTPHVDDGDNVIIINADKVVFTGKKYQDKTYYWHTGYAGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQMKNLRVYAGSEHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BARBK (50S ribosomal protein L13 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rplM PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.206e-25 Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+ VLGRLA+ VA ++GK KPT+ P+ DDGD IV+NA + +TG+K +K YYWHTGYIG +KERT ++ +E R P I KAV RM+PR ++ GS+HP Sbjct: 14 KWILIDAENLVLGRLATLVANRLRGKHKPTFTPHVDDGDNVIVINADKVVLTGKKYTDKKYYWHTGYIGGIKERTARQILEGRFPERIIEKAVERMIPRGPLGRRQMRNLRVYAGSQHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_RHOP2 (50S ribosomal protein L13 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplM PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.057e-25 Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TI 632 +W V DA G V+GRLA+ VA ++GK PTY P+ D GD I++NA + +TGRK NKVYY HTG+IG +KERT K +E R P + KAV RM+PR ++PG+EHP P T+ Sbjct: 14 KWVVIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNIIIINAAKVVLTGRKRDNKVYYHHTGFIGGIKERTAKSILEGRFPERVVEKAVERMIPRGPLGRVQMGNLRVYPGAEHPHEAQQPETL 141
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_DESPS (50S ribosomal protein L13 OS=Desulfotalea psychrophila GN=rplM PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.057e-25 Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 204 MKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 MK LA + I E W V DA+ +VLGRLAS++A+ ++GK KPT++ D+GD +V NA+ I +TG+K +K YY HTGYIG +KE + KE +E+ PT+ I KAV MLP+N ++ G+ HP Sbjct: 1 MKTYLAPVNEIEKE---WYVVDAENKVLGRLASEIASRLRGKHKPTFSSFIDNGDFIVVTNAEKIALTGKKWDDKTYYRHTGYIGGIKETSAKELLEKHPTDLITKAVRGMLPKNKMGRAQLKKLKVYVGAAHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_AGRVS (50S ribosomal protein L13 OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=rplM PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.057e-25 Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 +W + DA+G V+GRLA+ +AT ++GK K TY P+ DDGD IV+NA+ + +TG+K +K YYWHTGY G +KERT ++ +E R P + KAV RM+PR ++ GS HP Sbjct: 14 KWVIIDAEGLVVGRLATVIATYLRGKHKVTYTPHVDDGDNVIVINAEKVVLTGKKYTDKTYYWHTGYPGGIKERTARQIIEGRFPERVLEKAVERMIPRGPLGRRQMKNLRVYAGSAHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_KOCRD (50S ribosomal protein L13 OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=rplM PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.509e-25 Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA VLGRLASQ AT+++GK KPT+AP+ D GD I++NA+ + +TG KL+ K Y H+GY G LK + E +E++PT A+ KA+ MLP+N ++ G+EHP P Sbjct: 14 QWHVIDATDVVLGRLASQTATLLRGKHKPTFAPHVDTGDFVIIINAEKVALTGSKLQKKRAYRHSGYPGGLKSTSYAELLEKNPTRAVEKAIKGMLPKNKLAAQQLSKLKVYAGAEHPHQAQQP 137 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |