EY744208

Overview
NameEY744208
Unique NameEY744208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.951e-30
Identity = 77/215 (35.81%), Postives = 121/215 (56.28%), Query Frame = 3
Query:   78 MVLSKTFSESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFD----KPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            M+ SK   ES   +   F S      +P++T+ +  +    AY+++ DEL+ +G+ R NLA+F  T+ME E  KLM   + +N +D  EYP T +L NRCVNI+  + +AP +  +  +   T+GSSEA ML G+A K  W  +++AE    D    KP++V  +  QVCWEKF  Y++ +++ V + + +   +  +     DE TI V  ILG
Sbjct:    1 MLYSKENKES--YLEPVFGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAPKD--QKFMGTSTIGSSEACMLGGMAMKFAW--RKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILG 209          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEB_LISMO (Glutamate decarboxylase beta OS=Listeria monocytogenes GN=gadB PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.446e-30
Identity = 77/215 (35.81%), Postives = 121/215 (56.28%), Query Frame = 3
Query:   78 MVLSKTFSESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFD----KPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            M+ SK   ES   +   F S      +P++T+ +  +    AY+++ DEL+ +G+ R NLA+F  T+ME E  KLM   + +N +D  EYP T +L NRCVNI+  + +AP +  +  +   T+GSSEA ML G+A K  W  +++AE    D    KP++V  +  QVCWEKF  Y++ +++ V + + +   +  +     DE TI V  ILG
Sbjct:    1 MLYSKENKES--YLEPVFGSSAEDRDIPKYTLGKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAPKD--QKFMGTSTIGSSEACMLGGMAMKFAW--RKRAEKLGLDIYAKKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKEHMQLNTDQVLDYVDEYTIGVVGILG 209          
The following BLAST results are available for this feature:
BLAST of EY744208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
DCEB_LISIN4.951e-3035.81Glutamate decarboxylase beta OS=Listeria innocua G... [more]
DCEB_LISMO8.446e-3035.81Glutamate decarboxylase beta OS=Listeria monocytog... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744208 ID=EY744208; Name=EY744208; organism=Citrus sinensis; type=EST; length=847bp
TAGCTCTCTGTACTCTCTCTGACACCAAAAGAAAAAAAAAATCATTATTA
AATTTTGTTTGTTTTAATCTTTCAATCATGGTTCTTTCGAAGACATTTTC
CGAATCCGATGAGTCAATTCACTCCACCTTTGCCTCTCGCTACATCCGAA
ACTCTCTTCCTCGGTTCACGATGCCGGAGAACTCGATACCGAAGGAGGCG
GCGTACCAGATCATGAACGACGAGCTGATGCTCGACGGGAATCCAAGATT
GAACTTGGCTTCCTTCGTCACAACGTGGATGGAGCCTGAGGGTGACAAGC
TTATGATGGCTGCCATTAACGAGAACTACGTTGACATGGATGAGTATCCT
GTCACCACCAAGCTTCGCAATCGATGTGTGAACATTATGCCCCGAGTGGT
GAATGCTCCACTGGAGGACTCCGAGACGGCTGTCAGAGTTGGAACCGTAG
GATCATCGGAAGCCATAATGTTGGCCGGCCTTGCATTCAAAGGAAAGTGG
CCGAACAAGCGCAAGGCTGAAGGAAAGCCCTTTGACAAACCCAGCATTGT
CACTGGAGCGAACGTTCAGGTCTGCTGGGAGAAATTTGCGAGGTATTTTG
AGGGGGAGTTGAAGGAAGTGAAGCTGTCGGAAGGCTACTACGTGGAGGAC
CCCGCCAAAGCTGGACAAGTGGGGGATGAAAAAACAATCTGGGTAGCGGC
AATTCTGGGTTCTTCCCTCAAGGGGAAATTGAAAAAGGTCAAGCCCTTTA
AAAAACTTTTTGACAAAAAAAAAAAGGGAAAGGGGGGGGGAAAGCTCCAT
TTTTTTTTTGAGGTTTGTGGGGGGGGGGGTCATTGGACCATTTTTTT
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