EY744197

Overview
NameEY744197
Unique NameEY744197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 31/104 (29.81%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  303 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            ++   + E++N+ L   K+ +   +  FTA WC PC+FI P+  EL+ KH  V  +K+D+D+  L +   + ++ A+PTF++ +  +K+ ++VGA    ++  +
Sbjct:   13 VIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDE--LATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKL 114          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 35/117 (29.91%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  291 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQLYKKDGM 641
            G   ++   + E +N  +    +     +  FTA+WC PC+FI PV  E++ K  +V  +KID+D+  L++   +  + A+PTF+F + G  +  +VGA    +    E+L K  G+
Sbjct:    3 GEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDE--LQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEIN---EKLMKHGGL 114          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = 3
Query:  294 PSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQL 623
            PS +L   S   +     ++K+ +   +  F+A+WCGPC+ I P I  ++ K   V   K+D+D+  L     + N++A+PTF+  + GK++  I+GA+   L+  + +L
Sbjct:   24 PSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDE--LPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSKL 131          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 31/104 (29.81%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  303 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            ++   + E++N+ L   K+ +   +  FTA WC PC+FI P+  EL+ KH  V  +K+D+D+  L +   + ++ A+PTF++ +  +K+ ++VGA    ++  +
Sbjct:   13 VIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDE--LATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKL 114          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: THIO_MACMU (Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 3
Query:  312 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQL 623
            IES   F  +L    D  +  +  F+A WCGPCK I P    LS K+ +V   ++D+D    +   S+  +  +PTF FF+ G+KV E  GA   +L+ T+ +L
Sbjct:    5 IESKAAFQEALDDAGDKLV--VVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDD--CQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: THIO_HUMAN (Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 3
Query:  312 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQL 623
            IES   F  +L    D  +  +  F+A WCGPCK I P    LS K+ +V   ++D+D    +   S+  +  +PTF FF+ G+KV E  GA   +L+ T+ +L
Sbjct:    5 IESKTAFQEALDAAGDKLV--VVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDD--CQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 34/102 (33.33%), Postives = 56/102 (54.90%), Query Frame = 3
Query:  300 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLK 605
            N+ +I + E ++  L +   D    +  F+A WCGPCK + P   ELS KH  +    +D+D+  L    S  +I A PTF F ++G+++ ++VGA    L+
Sbjct:   24 NVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDE--LSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQ 123          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 31/106 (29.25%), Postives = 56/106 (52.83%), Query Frame = 3
Query:  303 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQ 620
            ++   + E++   L    +     +  FTA WC PC+FI PV  +L+ KH  V  +K+D+D+  L +   +  + A+PTF+F + G+    +VGA    +   +E+
Sbjct:    7 VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDE--LNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEK 110          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRX2_YEAST (Thioredoxin-2 OS=Saccharomyces cerevisiae GN=TRX2 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 33/98 (33.67%), Postives = 59/98 (60.20%), Query Frame = 3
Query:  312 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLK 605
            ++S  E++S+L     D L  + +F A WCGPCK I P+I + + ++     YK+D+D+  +     K  +S++PT +F++ GK+V  +VGA  + +K
Sbjct:    5 LKSASEYDSALAS--GDKLVVVDFF-ATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDE--VSDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIK 97          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: THIO_PIG (Thioredoxin OS=Sus scrofa GN=TXN PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = 3
Query:  312 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQL 623
            IES   F  +L    +  +  +  F+A WCGPCK I P    LS K+ +V   ++D+D    +   S+  +  +PTF FF+ G+KV E  GA   +L+ T+ +L
Sbjct:    5 IESKYAFQEALNSAGEKLV--VVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDD--CQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104          
The following BLAST results are available for this feature:
BLAST of EY744197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
TRXH_BRAOL3.673e-1229.81Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 ... [more]
TRXH5_ARATH3.673e-1229.91Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TR... [more]
TRXH2_ARATH3.673e-1230.00Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TR... [more]
TRXH1_BRANA3.673e-1229.81Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE... [more]
THIO_MACMU1.069e-1135.58Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2[more]
THIO_HUMAN1.396e-1135.58Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3[more]
TRXH9_ARATH1.823e-1133.33Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TR... [more]
TRXH3_ARATH2.381e-1129.25Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TR... [more]
TRX2_YEAST2.381e-1133.67Thioredoxin-2 OS=Saccharomyces cerevisiae GN=TRX2 ... [more]
THIO_PIG2.381e-1134.62Thioredoxin OS=Sus scrofa GN=TXN PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744197 ID=EY744197; Name=EY744197; organism=Citrus sinensis; type=EST; length=861bp
CGCCCGCAGTGGCACCGCTCCCAAAAACCCTAACGAAGAAGAGAGGTGAA
TTTGCAGAGAAAATGAGAGGAAGTTCTTCAGTTATTTTGCGTCGATTACT
TGTTCGACGCCAAGTCTTAAATCCCAATTCTACTAATATTGCAAAATTAC
TAATTTCGCATTCTACAAACAACACTACTGTTCCCAAGATACCCTCGTTC
CGTAATTATATTCCTGCTAGCTCCTCGCAATCACAGTCACAGATGCTTCC
TTCTCTTCAATTCCACAGAACTCTGTTCTCATCCCCAGATGGTCCATCAA
ATATTCTAGTCATCGAGTCAGGGGAAGAGTTCAATAGCTCACTTGGCAAA
GTTAAAGATGATTCTCTGCCAGCGATATTTTATTTCACTGCTGCTTGGTG
TGGCCCCTGCAAGTTTATATGGCCTGTCATAGGGGAGTTGAGTGCAAAAC
ACCCTCATGTAACAACATATAAGATTGACATTGACCAGAAAGGACTTGAA
AGCACATTAAGCAAGTTAAACATCAGTGCTGTGCCAACATTCTTGTTCTT
TCAACATGGAAAAAAGGTGGCTGAAATAGTTGGTGCTGAAGTCTCACGGT
TGAAAACAACTATGGAACAACTTTACAAGAAGGATGGAATGAAGTAAGGA
TAACTGGATCAAATGACCTTGAAAAATTTTCAGGAAAAATTTTGGGAAAG
AGGAAGATATTTGGTTTTTGGTGTCAGGGTAAAAAAAAACTTTGGAAAAT
TACGAATCCCTTTTAATTCAAACCCCTTTTTGGAAAGGAAAAATTAAAGG
GTTTTTTTTTTTTTTTTTTTTTTTCCCCTCCCCCGGGAACCTCTAAAATT
TTACGTTCTAA
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