EY661766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: RRP2_SPIOL (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.485e-19 Identity = 55/174 (31.61%), Postives = 98/174 (56.32%), Query Frame = 3 Query: 168 RKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPAR---ETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRL 677 R++YV N+P + + E++ + G + E++ K G++R F FVTM + E+A A + + + E+ GR I+V +K + + A E+ +K+Y+ NL+ V + L++FFS + +KV +S G+GFVSF+++EE EAAI +L+ L G+ +R+ Sbjct: 84 RRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRV 257
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PUB1_YEAST (Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.704e-18 Identity = 55/187 (29.41%), Postives = 103/187 (55.08%), Query Frame = 3 Query: 168 RKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRR 728 R +YV NL + + +K F G + +++I+ K KN N+AFV +A A+ + +++ I+++ +A + Q+S+S + L+V +L+ V LR F + +S V+++ G S GYGFVSF ++++A+ A+ S+ G++L GRPLR+ + K D+ + +N ++R Sbjct: 75 RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQ-----SQQSSS----DDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQR 252
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: NUCL_XENLA (Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.907e-18 Identity = 56/188 (29.79%), Postives = 99/188 (52.66%), Query Frame = 3 Query: 129 QTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHK-LYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 689 + K + +K+ R ++V N+P+S +V E++ +F D+ I K G N+ A+V ++ +EA A+ + E+ GR I V+F + + Q S + E K L V+NLS+ LRE F ++ + N+GR+ G+ F+ F++ E+A+ A+ S + E+ GR +RL+F Q Sbjct: 312 KNKTAENKKERDSRTLFVKNIPYSTTVEELQEIFE---NAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFTGE----KSQNSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEK-----ATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQ 487 HSP 2 Score: 77.411 bits (189), Expect = 1.264e-13 Identity = 51/182 (28.02%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNR 719 + V NL +S + ++ +F ++ I G+ + FAF+ +S E+A+ A++ + E+ GR IR+EF++ R SA ++ L+V LS L+E F + N +++V + + G S G+GFV F+T E+A+AA +++ E+ G + L F + D R Sbjct: 417 LVVNNLSYSATEDSLREVFEKATSIR----IPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQSKT----LFVRGLSEDTTEETLKEAFDGSVN---ARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAKPKGDSQRGGR 587
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.959e-18 Identity = 56/182 (30.77%), Postives = 94/182 (51.65%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQH-------KLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND 698 IYV N+ +++ E + LFAP G + + + K GK++ F FV E A AV + + +E++G+ I V A+K ++ + A + L+V NL ++ S L E F F ++S V + G+S G+GFV F+T EEA AI+ ++ + + G+PL + Q+ D Sbjct: 250 IYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKP-FGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKD 430 HSP 2 Score: 69.3218 bits (168), Expect = 3.442e-11 Identity = 48/192 (25.00%), Postives = 92/192 (47.92%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII--RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRRMYLRI 743 I++ NL + + + F+ G ++ V++ G+++ F FV + E AQAA+ + V+G ++ R + K + + S + +YV N+ E F A F ++S + + EG+S G+GFV+F E A A+ L+ KE+ G+ + + QK + +E +K+ +R+ Sbjct: 157 IFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAI-----ESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELF-APFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRL 342
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.477e-18 Identity = 60/183 (32.79%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 IYV NLP +++LF+ G ++ V++++ G +R F FV EEAQ AV + +EVSGR++ RVE + K+ Q R LYV NL + LR+ FS S+KV+ E G S G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEE 373 HSP 2 Score: 72.4034 bits (176), Expect = 4.066e-12 Identity = 58/188 (30.85%), Postives = 90/188 (47.87%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQH-KLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRRMY 734 I++ NL S + + F+ G ++ ++ + G +R F FV + E AQ A+N + ++ R + F FK R +R A AR + +YV NL V L++ FS F + S V N G S +GFV+F EEA+ A+ ++GKE+ GR L QK V N +R + Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV---FVGHFKSRR-EREAELGARALEFTNIYVKNLPVDVDEQGLQDLFS-QFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR--VERQNELKRRF 280
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.477e-18 Identity = 54/183 (29.51%), Postives = 97/183 (53.01%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K LF+ G + V++++ GK++ F FV+ E+A AV + + +E+SG+II +VE + K+ Q +R LY+ NL + LR+ FS + S+KV+ E +GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17 Identity = 57/182 (31.32%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKK-------FKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND 698 IYV N+ ++S + LF+P G + + + K + GK++ F FV E A AV + + +E++G+ I V A+K KK A+ L+V NL + S L E F F ++S V G+S G+GFV F T EEA AI+ ++ + + G+PL + Q+ D Sbjct: 235 IYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKP-FGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKD 415
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.198e-17 Identity = 54/183 (29.51%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K+LF G + V+++ + GK++ F FV+ E+AQ AV++ + +E++G+ I +VE + K+ Q R LYV NL + LR+ FS S+KV+ E GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.198e-17 Identity = 54/183 (29.51%), Postives = 93/183 (50.82%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K +F+ G + V+++ G++R F FV + EEAQ AV + + +EV+GR++ R+E + K+ Q R LYV NL + LR+ FS S+KV+ E G S G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17 Identity = 55/182 (30.22%), Postives = 89/182 (48.90%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKK-------FKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND 698 IYV N+ +S ++K LF P G + + + K GK++ F FV E A AV + + +E++G+ I V A+K KK ++ L++ NL + S L E F F ++S V G+S G+GFV F++ EEA AI+ ++ + G+PL + Q+ D Sbjct: 235 IYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKP-FGTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVALAQRKD 415 The following BLAST results are available for this feature:
BLAST of EY661766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661766 ID=EY661766; Name=EY661766; organism=Citrus sinensis; type=EST; length=921bpback to top |