EY661766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17 Identity = 54/183 (29.51%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K+LF G + V+++ + GK++ F FV+ E+AQ AV++ + +E++G+ I +VE + K+ Q R LYV NL + LR+ FS S+KV+ E GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17 Identity = 54/183 (29.51%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K+LF G + V+++ + GK++ F FV+ E+AQ AV++ + +E++G+ I +VE + K+ Q R LYV NL + LR+ FS S+KV+ E GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17 Identity = 54/183 (29.51%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K+LF G + V+++ + GK++ F FV+ E+AQ AV++ + +E++G+ I +VE + K+ Q R LYV NL + LR+ FS S+KV+ E GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17 Identity = 54/183 (29.51%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K LF G + V+++ + GK++ F FV+ E+AQ AV++ + +E++G+ I +VE + K+ Q R LYV NL + LR+ FS S+KV+ E GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17 Identity = 54/183 (29.51%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K LF G + V+++ + GK++ F FV+ E+AQ AV++ + +E++G+ I +VE + K+ Q R LYV NL + LR+ FS S+KV+ E GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: NUCL_CHICK (Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17 Identity = 51/181 (28.18%), Postives = 98/181 (54.14%), Query Frame = 3 Query: 141 EQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKF 683 ++ +K+ R ++V NLP+ + E+KN+F ++V ++ +K G ++ A++ + EA+ A+ + EV GR + +++ + + Q+ +T L V+NLS+ L+E F +S + ++N+GR GY FV F T E+A+ A++S + E+ GR +RL+F Sbjct: 362 KENKKERDARTLFVKNLPYRVTEDEMKNVFE---NALEVRLVLNKEGSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDYTGEKSQQESQKGGGERESKT---LIVNNLSYAASEETLQELFKK----ATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEF 532 HSP 2 Score: 78.1814 bits (191), Expect = 7.410e-14 Identity = 52/194 (26.80%), Postives = 100/194 (51.55%), Query Frame = 3 Query: 117 DTTVQTKPEQTQKQNIRRK---IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 689 D T + +++QK R+ + V NL ++ S ++ LF +++ ++ G+ + +AFV + E+A+ A+N + E+ GR IR+EF+ + +A + L+V LS LRE F + +S+++V + + G S G+GFV F++ E+A+AA +++ E+ G + L F + Sbjct: 441 DYTGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKKA---TSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSP-SWQKGNMNARGGFNQQSKTLFVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFAK 627
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 9.352e-17 Identity = 52/182 (28.57%), Postives = 91/182 (50.00%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKK-------FKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND 698 +Y+ NL + E +LF G + + ++K + K R F FV A+ E AQ AV++ + +E G+ + V A+K +K Q + L++ NL +V L+ FSA F ++S + +G+S G+GFV + T EEA A++ ++ + L G+PL + Q+ + Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSA-FGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRKE 443
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16 Identity = 58/201 (28.86%), Postives = 98/201 (48.76%), Query Frame = 3 Query: 129 QTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEV-SGRIIRVEFAKKFKKPRPQRSASAPARETQHK---------LYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 + + E +K + +YV N F ++K F P G + +++ + GK++ F FV + E A+AAV + +++ G+ + V A+ KK Q+ E + K LYV NL + LR FS N S+KV+ + EGRS G+GFV F EA A++ L+G+ + +PL + Q+ ++ Sbjct: 170 EREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYV--ARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTD-EEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEE 367 HSP 2 Score: 70.4774 bits (171), Expect = 1.545e-11 Identity = 42/185 (22.70%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKEL-MGRPLRLKFGQKNDDVSESNRKR 725 +++ NL + I + F+ G ++ ++ + G ++ + FV + E A ++++ + ++G+ + + KF + + + +YV N + L+EFF + ++S V +G+S G+GFV+F T E AEAA+ +L+GK++ G+ L + QK + + +++ Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKV---YVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEP-YGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRK 272
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16 Identity = 54/183 (29.51%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N ++ +F+ G + V+++ G++R F FV + EEAQ AV++ + +EV+GR+I R+E + K+ Q R LYV NL + LR+ FS S+KV+ E G S G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.595e-16 Identity = 55/183 (30.05%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKK-------FKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +YV NLP + E+K F G + ++K + G +R+F FV SPE A AV + + + ++ V A+K ++ Q S + LY+ NL V L+E FS N S KV+ S +G S G+GFV+++ EEA A+ ++GK + +PL + Q+ ++ Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEE 408 The following BLAST results are available for this feature:
BLAST of EY661766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661766 ID=EY661766; Name=EY661766; organism=Citrus sinensis; type=EST; length=921bpback to top |