EY661766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16 Identity = 61/183 (33.33%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAV-----NQFDTQE-VSGRIIRVEFAKKFKKPRPQRSASAPARETQHK-LYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +YV NL S + ++KN F G + ++K GK++ F FV + ++A AV ++FD +E GR + + + R +++ A + Q LYV NL + L+E FS SSKV+ + N G S G GFV+FAT EEA A+S L GK + +PL + Q+ +D Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPN-GTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKED 398 HSP 2 Score: 69.3218 bits (168), Expect = 3.442e-11 Identity = 45/159 (28.30%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKH-KGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDG 647 +YV +L ++ + +++ + F GTVV V + + ++ + +V +P++A A+ + + + G+ IRV ++ + P +RS + +++ NL + L + FS+ N VS KV +S+ G+S GYGFV +A +E A+ AI L+G Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYS--HRDPSVRRSGAG-------NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSS-GQSKGYGFVQYANEESAQKAIEKLNG 186 HSP 3 Score: 68.1662 bits (165), Expect = 7.668e-11 Identity = 44/184 (23.91%), Postives = 88/184 (47.83%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKR 725 I++ NL S + + F+ G +V ++ G+++ + FV A+ E AQ A+ + + ++ + + + F + + + S + + T +YV NL+ L+ F + ++S VV + EG+S G+GFV+F ++A A+ SL+G + + + QK + R R Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQV---YVGPFLRRQERDSTANKTKFTN--VYVKNLAESTTDDDLKNAFG-EYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVR 303
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16 Identity = 53/183 (28.96%), Postives = 93/183 (50.82%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N ++ +F+ G + V+++ G++R F FV + EEAQ AV++ + +EV+GR+I R+E + K+ Q R LYV NL + LR+ F S+KV+ E G S G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEE 373
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_DEBHA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16 Identity = 54/182 (29.67%), Postives = 89/182 (48.90%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKK-------FKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND 698 +Y N+ FS E K LF G + + + K GK++ F FV + E A AV++ + +E++G+ I V A+K KK ++ L++ NL + S L E F F ++S V G+S G+GFV F++ EEA AI+ ++ + + G+PL + Q+ D Sbjct: 234 VYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKP-FGSITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRKD 414
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16 Identity = 51/182 (28.02%), Postives = 93/182 (51.10%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND 698 +Y+ N+ + AE ++L P G + V + + + G ++ F FV + E A+ AV++ + +EV+G+ + + E + KK ++ A+ LYV NL + LR F A F ++S V + G S G+GFV +++ +EA A+S ++GK + +PL + Q+ D Sbjct: 229 VYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEA-FGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKD 409
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: YOCE_SCHPO (Uncharacterized RNA-binding protein C4F6.14 OS=Schizosaccharomyces pombe GN=SPBC4F6.14 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.034e-15 Identity = 51/187 (27.27%), Postives = 93/187 (49.73%), Query Frame = 3 Query: 159 NIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKH-KGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARET-----QHKLYVSNLSWKVRS-THLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND 698 N ++V NL + ++ N F+ G + ++ + + G+NR + FVT + E+AQ A + +++ GRI+R++FA K+ + ++T + +L + NL W ++ HL FS F V + GR G+ FV ++ AE A++SL+G E+ GRP+ + + D Sbjct: 2 NSNSTLFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLEDAQRAAKELKNKKLHGRILRLDFATPRKRSEVDTDQNKAVKKTIRQDNRPRLIIRNLPWSIKKPQHLEPHFS-KFGKVREIKIPTKGGGRMCGFAFVWMKDRKAAEEAMNSLNGTEIDGRPIAVDWAVSKD 187
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.350e-15 Identity = 52/183 (28.42%), Postives = 92/183 (50.27%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N +K F G + V+++ GK+R F FV+ E+AQ AV+ + ++++G+ I +VE + K+ Q R LYV NL + LR+ F+ + S+KV+ E GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373 HSP 2 Score: 69.707 bits (169), Expect = 2.636e-11 Identity = 46/174 (26.44%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQH-KLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQK 692 I++ NL S + + F+ G ++ +++ + G ++ + FV + E A+ A+++ + ++ R + F +FK R +R A AR + +Y+ N + L+E+F +S KV+ + + G+S G+GFVSF E+A+ A+ ++GK+L G+ + + QK Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKV---FVGRFKS-RKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQK 268
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.764e-15 Identity = 56/182 (30.77%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKK--PRPQRSASAPARETQHK-----LYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND 698 +YV NL A+ + +F P G V V + + GK+R F FV + E A AV + + +E+ G+ + V A+K ++ +R + E K L+V NL + S L E F F ++S V + G+S G+GFV F++ EEA AI+ ++ + + G+PL + Q+ D Sbjct: 241 VYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKP-FGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKD 421
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.304e-15 Identity = 54/187 (28.88%), Postives = 89/187 (47.59%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRV-----------EFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +YV NLP E++ F G + +++ + G +R F FV E A +AV + + + ++ V E +KF++ R R + LY+ NL V L+E FS N SSKV+ +G S G+GFV+++ EEA A+S ++GK + +PL + Q+ +D Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGAN----LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNP-QGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKED 412
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 3.929e-15 Identity = 50/183 (27.32%), Postives = 93/183 (50.82%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRII-------RVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDD 701 +Y+ N + +K +F G + V+++ GK++ F FV+ E+AQ AV++ + ++++G+ + +VE + K+ Q R LYV NL + LR+ F S+KV+ E GRS G+GFV F++ EEA A++ ++G+ + +PL + Q+ ++ Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373 HSP 2 Score: 71.633 bits (174), Expect = 6.936e-12 Identity = 45/174 (25.86%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQH-KLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQK 692 I++ NL S + + F+ G ++ +++ + G ++ + FV + E A+ A+++ + ++ R + F +FK R +R A AR + +Y+ N + L+E F + P S V + G+S G+GFVSF E+A+ A+ ++GK++ G+ + + QK Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKV---FVGRFKS-RKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFG-KYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQK 268
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14 Identity = 63/219 (28.77%), Postives = 101/219 (46.12%), Query Frame = 3 Query: 129 QTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQ--RSASAPARETQHK-----LYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKND---DVSESNRKRRMYLRINLQS 755 Q K E+T+ +Y N+ + E + LF G + + + + GK++ F FV EAQ AV++ + G+ + V A+K + + RS A E K LY+ N+ LRE F A F ++S + + G S G+GFV ++ EEA A+S ++GK L RPL + Q+ D E+ +R LR+ Q+ Sbjct: 216 QAKIEETRANFTN--VYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEF-APFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVRRQQLEAQIMQRNQLRLQQQA 431 The following BLAST results are available for this feature:
BLAST of EY661766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661766 ID=EY661766; Name=EY661766; organism=Citrus sinensis; type=EST; length=921bpback to top |