EY661766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13 Identity = 61/237 (25.74%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 33 PHSSNSTPSLIYNFPTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKFGQKNDDVSESNRKRRMY 734 P SN S N P+ N + C + T T +T + V LP + + E ++LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF S ++Y Sbjct: 15 PQVSNGPTSNTSNGPSSNN--RNCPSPMQTGAATDDSKTN-------LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLY 231
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13 Identity = 61/237 (25.74%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 33 PHSSNSTPSLIYNFPTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKFGQKNDDVSESNRKRRMY 734 P SN S N P+ N + C + T T +T + V LP + + E ++LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF S ++Y Sbjct: 10 PQVSNGPTSNTSNGPSSNN--RNCPSPMQTGATTDDSKTN-------LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLY 226
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 48/183 (26.23%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRV-----------EFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 689 ++V N+ ++K LF G V++I+ GK++ F FV + E AQ AV + + G+++ V E ++F++ R + + P +Y+ NL + L+E FS+ + +KV+ E +G+ G+G V F++ EEA A+ ++G+ + +PL + GQ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP----IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGK--GFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP5_PANTR (Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 48/183 (26.23%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRV-----------EFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 689 ++V N+ ++K LF G V++I+ GK++ F FV + E AQ AV + + G+++ V E ++F++ R + + P +Y+ NL + L+E FS+ + +KV+ E +G+ G+G V F++ EEA A+ ++G+ + +PL + GQ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP----IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGK--GFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP5_HYLLA (Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 48/183 (26.23%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRV-----------EFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 689 ++V N+ ++K LF G V++I+ GK++ F FV + E AQ AV + + G+++ V E ++F++ R + + P +Y+ NL + L+E FS+ + +KV+ E +G+ G+G V F++ EEA A+ ++G+ + +PL + GQ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP----IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGK--GFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP5_HUMAN (Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 48/183 (26.23%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRV-----------EFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 689 ++V N+ ++K LF G V++I+ GK++ F FV + E AQ AV + + G+++ V E ++F++ R + + P +Y+ NL + L+E FS+ + +KV+ E +G+ G+G V F++ EEA A+ ++G+ + +PL + GQ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP----IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGK--GFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 48/183 (26.23%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRV-----------EFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 689 ++V N+ ++K LF G V++I+ GK++ F FV + E AQ AV + + G+++ V E ++F++ R + + P +Y+ NL + L+E FS+ + +KV+ E +G+ G+G V F++ EEA A+ ++G+ + +PL + GQ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVP----IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGK--GFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: RBM19_HUMAN (Probable RNA-binding protein 19 OS=Homo sapiens GN=RBM19 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13 Identity = 54/192 (28.12%), Postives = 91/192 (47.40%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGK----NRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRP--QRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFE--SNEGRSAGYGFVSFATKEEAEAAISSL-DGKELMGRPLRLKFGQKNDDVSESNRK 722 +++ NL + + ++K +F+ GTV I K K + F FV PE+AQ A+ Q V G + V +++ KP R P ++T K+ V N+ ++ S +RE FS F + + + + + G G+GFV F TK++A+ A ++L L GR L L++ + RK Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFS-TFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRK 922
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV2_XENLA (ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13 Identity = 50/185 (27.03%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 141 EQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK--GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 683 E ++ + + V LP + + E+K+LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 57 ESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF 230
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: RBM19_MOUSE (Probable RNA-binding protein 19 OS=Mus musculus GN=Rbm19 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13 Identity = 54/192 (28.12%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGK----NRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKP--RPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSA--GYGFVSFATKEEAEAAISSL-DGKELMGRPLRLKFGQKNDDVSESNRK 722 +++ NL +S + +K +F+ G + I K K + F FV PE+AQ A+ Q V G + V +++ KP R P ++T K+ V N+ ++ +RE FS F + + + + G A G+GFV F TK++A+ A ++L L GR L L++ V RK Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFS-TFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEVTVQTLRRK 914 The following BLAST results are available for this feature:
BLAST of EY661766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661766 ID=EY661766; Name=EY661766; organism=Citrus sinensis; type=EST; length=921bpback to top |