EY661766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13 Identity = 55/207 (26.57%), Postives = 92/207 (44.44%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKK-------FKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRRMYLRINLQSHSYSNF 773 +Y+ N+ + E + L A G V + + G+N+ F FV + E+A V + + E G+ + V A+K KK A+ L++ NL + L E F A + ++S V + G+S G+GFV F+T EEA AI+ + + + G+PL + Q+ D RR L +Q+ + F Sbjct: 218 VYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEF-APYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKD-------VRRSQLAQQIQARNQMRF 416 HSP 2 Score: 70.0922 bits (170), Expect = 2.018e-11 Identity = 48/192 (25.00%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 111 LQDTTVQTKPEQTQKQN----IRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNR-NFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPL 671 L++ ++Q K E T ++N + +YV +L S S A + ++F+P G V + + + K +A+V + A+ A+ + + + G++ R+ ++++ R + + + +++ NL + + L + FS N +SSKV + G+S G+G+V F E A AI +L+G L G+ + Sbjct: 12 LENLSLQDKQEGTNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGN---------IFIKNLHPDIDNKALYDTFSVFGNILSSKVATDET-GKSKGFGYVHFEEDESASEAIDALNGMLLNGQEI 193
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12 Identity = 47/194 (24.23%), Postives = 93/194 (47.94%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRRMYLRINLQS 755 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ N+ +V R+ F F ++S + EG+S G+GFV+F+T + A+AA+ ++ KE+ G+ L + QK + E RK+ R+ S Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--VYIKNIDQEVTDEEFRKMFE-KFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKAS 331
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12 Identity = 47/194 (24.23%), Postives = 93/194 (47.94%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRRMYLRINLQS 755 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ N+ +V R+ F F ++S + EG+S G+GFV+F+T + A+AA+ ++ KE+ G+ L + QK + E RK+ R+ S Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--VYIKNIDQEVTDEEFRKMFE-KFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKAS 331
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12 Identity = 48/196 (24.49%), Postives = 92/196 (46.94%), Query Frame = 3 Query: 114 QDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKG-GKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKP-----RPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKF 683 +D K ++ ++ I+V L WS +K F G V+ +I +G ++R + +V + A+ A+ + +E+ GR I + + KP R ++ P+ E L++ NLS+ + E F+ + VS ++ + G+G+V F+ E+A+ A+ +L G+ + RP+RL F Sbjct: 150 EDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTS--KPAGNNDRAKKFGDTPS-EPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDF 342
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV3_XENLA (ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12 Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 3 Query: 165 RRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 683 + + V LP + + E K+LF G + ++++ K G++ + FV P +A A+N + ++ + I+V +A R +SA R+ LYVS+L + + + FS ++S+++ + G S G GF+ F + EAE AI L+G++ +G P+ +KF Sbjct: 33 KTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYA---------RPSSASIRDAN--LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKF 197
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV3_MOUSE (ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12 Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 3 Query: 165 RRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 683 + + V LP + + E K+LF G + ++++ K G++ + FV + P +A A+N + ++ + I+V +A R +SA R+ LYVS L + + + FS ++S+++ + G S G GF+ F + EAE AI L+G++ +G P+ +KF Sbjct: 38 KTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKF 202
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV2_PONAB (ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12 Identity = 49/179 (27.37%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 156 QNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 683 ++ + + V LP + + E+K+LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF 202
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12 Identity = 49/179 (27.37%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 156 QNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 683 ++ + + V LP + + E+K+LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF 202
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV2_HUMAN (ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12 Identity = 49/179 (27.37%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 156 QNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 683 ++ + + V LP + + E+K+LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF 202
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12 Identity = 46/194 (23.71%), Postives = 93/194 (47.94%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRRMYLRINLQS 755 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ NL ++ R+ F F ++S + EG+S G+GFV+++T + A+AA+ ++ KE+ G+ L + QK + E RK+ R+ S Sbjct: 138 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--VYIKNLDQEISEEEFRQMFE-KFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKAS 327 The following BLAST results are available for this feature:
BLAST of EY661766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661766 ID=EY661766; Name=EY661766; organism=Citrus sinensis; type=EST; length=921bpback to top |