EY661766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: ELAV3_XENTR (ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11 Identity = 48/177 (27.12%), Postives = 89/177 (50.28%), Query Frame = 3 Query: 165 RRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGR-SAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 683 + + V LP + + E K+LF G + ++++ K G++ + FV P +A A+N + ++ + I+V +A R +SA R+ LYVS+L + + + FS ++S+++ + G S G GF+ F + EAE AI L+G++ +G P+ +KF Sbjct: 34 KTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYA---------RPSSASIRDAN--LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKF 199
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11 Identity = 56/204 (27.45%), Postives = 97/204 (47.55%), Query Frame = 3 Query: 168 RKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSAS---APARETQH-KLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKN----DDVSESNRKRRMYLRINLQS 755 + +YV NL + A I LF+ G + ++I G N + FV A AA+ + +++ G+ ++V +A + S+S + R H ++V +LS ++ + ++ F+ ++VV + G+S GYGFVSF K +AE AI + G+ L GR +R + + ESN K+ Y + QS Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAG-NDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQS 209 HSP 2 Score: 68.1662 bits (165), Expect = 7.668e-11 Identity = 54/209 (25.84%), Postives = 96/209 (45.93%), Query Frame = 3 Query: 105 STLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKG-GKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLS--------WKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDV 704 S +DT+ T TQ+ ++V +L + +IK FAP G + D ++K GK++ + FV+ + +A+ A+ Q Q + GR IR +A + K P P+ + + ++ + VS S V S + F+P + E GY FV F++ E A AI S++G + G ++ +G++ D+ Sbjct: 86 SQKKDTSSSTVVS-TQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR-KPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQ--IMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDM 290
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11 Identity = 56/204 (27.45%), Postives = 97/204 (47.55%), Query Frame = 3 Query: 168 RKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSAS---APARETQH-KLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKN----DDVSESNRKRRMYLRINLQS 755 + +YV NL + A I LF+ G + ++I G N + FV A AA+ + +++ G+ ++V +A + S+S + R H ++V +LS ++ + ++ F+ ++VV + G+S GYGFVSF K +AE AI + G+ L GR +R + + ESN K+ Y + QS Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAG-NDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQS 209
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: RBM39_MOUSE (RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11 Identity = 53/198 (26.77%), Postives = 93/198 (46.97%), Query Frame = 3 Query: 147 TQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGK-NRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRP-------QRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESN 716 T ++ R ++ L +++ F+ G V DV +I + + +R A+V + A+ Q V G I V+ A + +K R Q+ ++ P R LYV +L + + LR F S +++ +S GRS GYGF++F+ E A+ A+ L+G EL GRP+++ + D S ++ Sbjct: 146 TPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAIG-LTGQRVLGVPIIVQ-ASQAEKNRAAAMANNLQKGSAGPMR-----LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSAS 336
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: YKX5_SCHPO (Uncharacterized RNA-binding protein C328.05 OS=Schizosaccharomyces pombe GN=SPAC328.05 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11 Identity = 53/212 (25.00%), Postives = 99/212 (46.70%), Query Frame = 3 Query: 108 TLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRV----EFAKKFKKPRPQRSASAPARETQ--HKLYVSNLS---------------WKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLK 680 T +D + + TQ++ R++YV NL + E+K G V++ EI+ G ++ A + ++ EEA+ A+ Q+ GR++ + E +F SAS+ ++++ +L+V N+S + VR L++ F + + + + + EGRS G G V ++ +EA AI L + MGR L ++ Sbjct: 49 TERDPHLGNGQKYTQQE---RRVYVGNLSYQVRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEARTAIKTLSNQKFMGRLVYIREDREQNARFGSSSVSPSASSNGKDSEPDRQLFVGNVSSISNPLYSFPRTLLPYNVRWQDLKDLFRQAGSVIRADIQM-NQEGRSRGIGIVVMSSMKEAMHAIQMLHNTDFMGRTLEVR 256
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11 Identity = 57/228 (25.00%), Postives = 106/228 (46.49%), Query Frame = 3 Query: 147 TQKQNIRRKIYVF--NLPWSFSVAEIKNLFAPCGTVVDVEIIKHKG-GKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWK--------VRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRRMYLRINLQSHSYSNFWWXADYSA 797 +QK++ +VF +L + +IK+ FAP G + D ++K GK++ + FV+ + +A+ A+ Q + GR IR +A + K P P+ + ++ + + V+ S K + S + F+P + E GY FV F+T E A AI S++G + G ++ +G+++ D+++ N ++ Y + S Y N Y A Sbjct: 105 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ--IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK-NFQQVDYSQWGQWSQVYGNPQQYGQYMA 328
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11 Identity = 45/183 (24.59%), Postives = 85/183 (46.45%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRK 722 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +YV N++ +V R F + SS + + G+S G+GFV+F + E+A A+ L+ KE G+ L + QK + E RK Sbjct: 151 VFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIP-KKDRQSKFDEMKANFTN--IYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRK 330
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: HNRPM_RAT (Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus GN=Hnrnpm PE=1 SV=4) HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11 Identity = 51/177 (28.81%), Postives = 84/177 (47.46%), Query Frame = 3 Query: 165 RRKIYVFNLPWSFSVAEIKNLFAP-CGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQK 692 R + ++ N+P+ +K+L G V VE++ GK+R A V E + A + +SGR ++V K+ R A A ++V+NL +KV L+E FS V + ++ E +G+S G G V+F EA AIS +G+ L RP+ +K ++ Sbjct: 69 RYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKV---KEDPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADIL-EDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDER 241
BLAST of EY661766 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11 Identity = 46/194 (23.71%), Postives = 89/194 (45.88%), Query Frame = 3 Query: 174 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNRKRRMYLRINLQS 755 +++ NL + + + FA G ++ ++ + + G ++ + FV + E AQ A+ + ++ + + V KK R + A T +YV N+ R+ F S+ + ++ G+S G+GFV+F + + A AA+ +L+ K+ G+ L + QK + E RK+ RI S Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIA-KKDRQSKFEEMKANFTN--VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKAS 335 The following BLAST results are available for this feature:
BLAST of EY661766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661766 ID=EY661766; Name=EY661766; organism=Citrus sinensis; type=EST; length=921bpback to top |