EY661545

Overview
NameEY661545
Unique NameEY661545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.811e-26
Identity = 56/129 (43.41%), Postives = 82/129 (63.57%), Query Frame = 3
Query:  138 MALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIA-PAKDLIDERHPAVYKNFTYAEYYQK 521
            + +NYYP CPQP+L  G+  HTD + ++ +L + VPGLQVL   +W+     P T IV++GD +++LSN RY SVLHR LVN +  RIS   F  P PD+V+  P  +L+ E HPA +   T+ ++  +
Sbjct:  234 LKINYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDR 362          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.283e-26
Identity = 65/168 (38.69%), Postives = 99/168 (58.93%), Query Frame = 3
Query:   12 EVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRE-RISIPTFYC---PSPDA-VIAPAKDLIDERHPAVYKNFT 500
            E++ EY   V  L   + E +SE+LGL  + + +     G  M  + +PPCP+P+ T+G   HTD + +T+LL D+  GLQVL +G W+ V P P   I N+GD +Q++SND++ S+ HR L N   E RIS+  F+     SP + V  P K+L+ E +P  Y++ T
Sbjct:  169 EIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSRVYGPIKELLSELNPPKYRDTT 336          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.206e-26
Identity = 69/196 (35.20%), Postives = 108/196 (55.10%), Query Frame = 3
Query:   15 VVAEYCTSVRGLVLRLLEAISESLGL-QRDFIDKALG--KHGQHMALNYYPPCPQPDLT----YGLPGHTDPNLITVLLQDDVPGLQV-LRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKASTA 578
            VV  Y T+V+ +   +LE ++E LG+ QR+ + + L   K      LN+YPPCP+         G   HTDP +I+VL  +   GLQ+ L +G W+ V P   +F +N+GD +QV++N R+KSV HR L +  + R+S+  F  P+    IAP   ++ +    +YK FT+ EY +  +   L +  L  F+ S A
Sbjct:  136 VVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVMLKGEECLYKEFTWCEYKKAAYTSRLADNRLAPFQKSAA 331          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.072e-25
Identity = 66/174 (37.93%), Postives = 95/174 (54.60%), Query Frame = 3
Query:   15 VVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHG------QHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNG--KWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEY 512
            V+ E+   +R L  +LLE    +LGL  + +     +H         M LN+YP CP P    GL  HTD    T +LQ  VPGLQ+ R+G  +W+ V  +P   +VN+GD  Q+L+N R+ SV HRA+VN D +RIS+  F  P     +AP ++ +    PA Y+  T+ EY
Sbjct:  162 VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREAL-AGTPAAYRAVTWPEY 334          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.073e-25
Identity = 66/174 (37.93%), Postives = 94/174 (54.02%), Query Frame = 3
Query:   15 VVAEYCTSVRGLVLRLLEAISESLGLQRDFI------DKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNG--KWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEY 512
            V+ E+   +R L  +LLE    +LGL  + +       K        M LN+YP CP P    GL  HTD    T +LQ  VPGLQ+ R+G  +W+ V  +P   +VN+GD  Q+L+N R+ SV HRA+VN D +RIS+  F  P     +AP ++ +    PA Y+  T+ EY
Sbjct:  162 VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREAL-AGTPAAYRAVTWPEY 334          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.947e-25
Identity = 67/192 (34.90%), Postives = 109/192 (56.77%), Query Frame = 3
Query:   12 EVVAEYCTSVRGLVLRLLEAISESLGLQ-RDFIDKALG--KHGQHMALNYYPPCPQPD---LTYGLPGHTDPNLITVLLQDDVPGLQV-LRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFK 566
            E V EY   ++ +  ++LE ++E LG++ RD + K L   K    + LN+YP   +     +  G   HTDP +I+VL  ++  GLQ+ +++G W+ V P  ++F +N+GD +QV++N R+KSV HR L +  R RIS+  F  P     IAP   L+ E+   +YK FT+++Y    +   L +  L LF+
Sbjct:  139 ESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYFGGPPLSQKIAPLPCLVPEQDDWLYKEFTWSQYKSSAYKSKLGDYRLGLFE 330          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.185e-24
Identity = 62/174 (35.63%), Postives = 96/174 (55.17%), Query Frame = 3
Query:   12 EVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMA------LNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGK-WLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEY 512
            E++ EY   ++ L  +L+     SLG++   I  A G +           LN+YP CP+PD   GL  HTD  L+T+L Q++  GLQV R+   W+   P+P + +VN+GD + +L+N  + SVLHRA VN  R R S+   + P  D +I+P   L+D     +Y + T+ +Y
Sbjct:  158 EIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWA-GPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSDIMISPLPKLVDPLQSPLYPSLTWKQY 330          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.185e-24
Identity = 65/174 (37.36%), Postives = 94/174 (54.02%), Query Frame = 3
Query:   15 VVAEYCTSVRGLVLRLLEAISESLGLQRDFI------DKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNG--KWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEY 512
            V+ E+   +R L  +LLE    +LGL  + +       K        M LN+YP CP P    GL  HTD    T +LQ  VPGLQ+ R+G  +W+ V  +P   +VN+GD  Q+L+N R+ SV HRA+VN + +RIS+  F  P     +AP ++ +    PA Y+  T+ EY
Sbjct:  162 VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVAPLREAL-AGTPAAYRAVTWPEY 334          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.227e-22
Identity = 63/202 (31.19%), Postives = 107/202 (52.97%), Query Frame = 3
Query:   15 VVAEYCTSVRGLVLRLLEAISESLGL-QRDFIDKAL-GKHGQHMA-LNYYPPCPQ--------------PDLTYGLPGHTDPNLITVLLQDDVPGLQV-LRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFK 566
            +V +Y  +V+ L   +LE  +E L +  +  + K +  +H   +  +N+YPP  +               +   G   H+DP ++T+L  ++V GLQ+   +G W+PV P P+ F V +GD +QVL+N R+ SV HR L N  + R+S+  F  P  + +I+P   ++    P +Y+ FT+A+Y Q  +   L +  LD FK
Sbjct:  131 IVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTILRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMVTAHSPCLYRPFTWAQYKQAAYALRLGDTRLDQFK 332          
BLAST of EY661545 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.092e-21
Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 3
Query:   15 VVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKAL-GKHGQ-------HMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQV----LRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDRERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEY 512
            V+ EY  ++  L  RL+  +  SLGL  + +   +  K G         + LN YP CP P L  GL  HTD +L+T+L Q ++PGL++        +W+ V PI  + +V +GD   ++SN +++S +HRA+VN    R+S   F  P  +  I P     D+ HP +Y+   + EY
Sbjct:  157 VMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGPLTS--DKNHPPIYRRLIWEEY 332          
The following BLAST results are available for this feature:
BLAST of EY661545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
LDOX_MAIZE4.811e-2643.41Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
GSL_ARATH6.283e-2638.69Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G2OX_PHACN8.206e-2635.20Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G3O21_WHEAT1.072e-2537.93Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
G3O22_WHEAT4.073e-2537.93Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
G2OX2_ARATH6.947e-2534.90Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G3OX2_ARATH1.185e-2435.63Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G3O23_WHEAT1.185e-2437.36Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G2OX2_PEA3.227e-2231.19Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]
G3OX3_ARATH2.092e-2133.15Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-034-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661545 ID=EY661545; Name=EY661545; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGAAGTTGTGGCTGAGTACTGTACAAGTGTAAGAGGGTTA
GTGCTGAGGCTACTTGAGGCCATATCTGAGAGCTTGGGGCTTCAAAGGGA
TTTTATAGACAAGGCATTAGGCAAACACGGGCAACATATGGCTTTGAACT
ACTATCCACCCTGTCCTCAGCCCGATCTAACTTATGGATTGCCAGGACAC
ACTGATCCAAATTTAATAACTGTTCTTCTTCAGGATGATGTCCCTGGATT
GCAGGTACTTAGAAATGGGAAATGGCTTCCTGTCAGTCCTATTCCCAACA
CCTTCATTGTCAACATCGGCGATCAGATGCAGGTTCTTAGCAATGATCGA
TACAAGAGTGTGCTCCATCGAGCTCTGGTGAATTGCGACAGGGAGCGCAT
ATCCATTCCAACGTTCTATTGTCCGTCACCTGATGCTGTGATAGCTCCTG
CTAAGGATTTGATCGATGAACGTCACCCGGCTGTCTATAAAAATTTCACG
TATGCTGAATATTACCAGAAATTTTGGAACAGGGGACTTGACGAACGTTG
CTTGGACCTGTTCAAAGCTTCAACTGCTTGATCTTGTCATTAACTATGTC
TTTGAAGATCAAATAGCTGAACGCTGCTTTCGACATGTTCAAAGCTTCAT
GCTGCTTGATCTTATCATTATTATGTAGNTGGAGATCAAATTTCATTAGC
TCTAAATTAATAATTGATCATATTTCATCTGGTATCAAACAACTTGCTAG
GTATAATTGTACTTNNCTAATCTACTTGTTTTACCGGTTCAGAATAATGA
TATTTTTATATTTGCTGCCTGAAAANNAAAAANNAAAANANNACANNNNN
NNNNNNNCAAGGCGGGCCGCTCTAGAGAATCAAGCTTACGACGCCGGAT
back to top