EY661541

Overview
NameEY661541
Unique NameEY661541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_STRPJ (Trigger factor OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 57/211 (27.01%), Postives = 98/211 (46.45%), Query Frame = 3
Query:   87 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 710
            KG +F    G  + +PGF D + G   GET    + FPE ++ E L G +A+F     E+  +++P LDD LA  +     T+  +KE   ++    ++ A   A + A +D   +  EI ++P+ +  E+  +     L  +Q    +N      ++     +E L NQ +    +  K NL +  + K E    S E++ KEVE   A+
Sbjct:  183 KGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGKEAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGAAIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQR-QGINPDMYFQITG--TTQEDLHNQYQAEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAAD 390          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_STRP7 (Trigger factor OS=Streptococcus pneumoniae (strain 70585) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 57/211 (27.01%), Postives = 98/211 (46.45%), Query Frame = 3
Query:   87 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 710
            KG +F    G  + +PGF D + G   GET    + FPE ++ E L G +A+F     E+  +++P LDD LA  +     T+  +KE   ++    ++ A   A + A +D   +  EI ++P+ +  E+  +     L  +Q    +N      ++     +E L NQ +    +  K NL +  + K E    S E++ KEVE   A+
Sbjct:  183 KGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGKEAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELATAKEEAYKDAVEGAAIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQR-QGINPDMYFQITG--TTQEDLHNQYQAEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAAD 390          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_STRP4 (Trigger factor OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 57/211 (27.01%), Postives = 98/211 (46.45%), Query Frame = 3
Query:   87 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 710
            KG +F    G  + +PGF D + G   GET    + FPE ++ E L G +A+F     E+  +++P LDD LA  +     T+  +KE   ++    ++ A   A + A +D   +  EI ++P+ +  E+  +     L  +Q    +N      ++     +E L NQ +    +  K NL +  + K E    S E++ KEVE   A+
Sbjct:  183 KGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGKEAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGAAIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQR-QGINPDMYFQITG--TTQEDLHNQYQAEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAAD 390          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_STREM (Trigger factor OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 53/211 (25.12%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   87 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 710
            KG +F  E G  + +PGF + + G + G+T    + FPE+++ E L G  A+F     E+  +++P+LDD LA  +     T++++K    ++    ++ A D A + A ++   +  EI ++P+ +  ++  +     +  MQ    ++      L+     +E L  Q E      +K NL +  I K E  + S +++ KE+ +  AE
Sbjct:  183 KGDNFSLELGSGQFIPGFEEQLVGAKAGDTVEVNVTFPENYQAEDLAGKAAKFVTTVHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEASKEAAYDDALEGAAIELAVENAEIVELPEEMVHDEVHRSVNEFMASMQR-QGISPDMYFQLTGTS--QEDLHKQHEAEADKRVKTNLVIEAIAKAEGFEASDDEIEKEINDLAAE 390          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_STRE4 (Trigger factor OS=Streptococcus equi subsp. equi (strain 4047) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 53/211 (25.12%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   87 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 710
            KG +F  E G  + +PGF + + G + G+T    + FPE+++ E L G  A+F     E+  +++P+LDD LA  +     T++++K    ++    ++ A D A + A ++   +  EI ++P+ +  ++  +     +  MQ    ++      L+     +E L  Q E      +K NL +  I K E  + S +++ KE+ +  AE
Sbjct:  183 KGDNFSLELGSGQFIPGFEEQLVGAKAGDTVEVNVTFPENYQAEDLAGKAAKFVATVHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEASKEAAYDDALEGAAIELAVENAEIVELPEEMVHDEVHRSVNEFMASMQR-QGISPDMYFQLTGTS--QEDLHKQHEAEADKRVKTNLVIEAIAKAEGFEASDDEIEKEINDLAAE 390          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_RUBXD (Trigger factor OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=tig PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 49/211 (23.22%), Postives = 104/211 (49.29%), Query Frame = 3
Query:   69 IPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQA-GMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN 698
            +P AE + +  +   G+ +L  F  ++ G++ GE K F + FP  +R+E LRG    F V  +E+  RDLP LDD  A K      T+E+++  + ++  E  +   +      +L+ + +  E+++P+ + E++  ++  +    + A G+K  +    A +     +EF     ++  + +K+ L +  +   E ++   E +  E+E+
Sbjct:  181 LPGAEAEDYMLEVGRGE-LLEDFEKNLVGMKAGERKQFAVTFPMDYREESLRGQSVLFRVHVKEIKERDLPPLDDEFA-KEASEFETLEELRAAIREQLEEAARRRAEGEFRARVLEAVAERAEVEVPEVMVEDKAEEMVRSFERSVSAQGIKPEDYYRIAGTGR---EEFKRQVRDDAADTVKKELVLDAVVAAEGIEADEEAVRHEIEH 386          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_IDILO (Trigger factor OS=Idiomarina loihiensis GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 61/242 (25.21%), Postives = 113/242 (46.69%), Query Frame = 3
Query:   87 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQRNQNLVGIPVENG*KLLQGAKFPMVERTAE 809
            K   F  E G+ +++PGF D I GI+ GE K+  + FPE +  E+L+G +AQF V  +++  RDLP+L+D            +E +KE + +      + A        +L  + +  ++++P+S+ +++  QL   Q  Q   G   N +Q+     P    E  E Q +     +K  L +G++ +   L+ + ++ V E+  + A   +  Q +V     N   + Q     + E+  E
Sbjct:  181 KADDFALELGEGRMIPGFEDQIKGIKAGEEKTIEVTFPEDYHAENLKGKEAQFVVTAKKVEARDLPELNDEFVALFGVKEGGVEALKEEVRKNMERELKNAVKAKVKEQVLKGIVENNDVELPKSMIDQEIDQL-RKQAAQRFGG---NVEQM-----PDLPAELFEEQAK---ERVKVGLLLGEVIRGNELK-ADDEKVDEIIATAASAYEDPQEVVEYYKSNNDMMQQVRNLALEEQAIE 409          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_CLOPH (Trigger factor OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 64/231 (27.71%), Postives = 107/231 (46.32%), Query Frame = 3
Query:   12 AIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG--AQLLQMQAGMKLNEQ-QLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEV 692
            A++D    TID  E  V  +     KG  +    G    +  F D + G   GE     + FP  +    L G  A F V+ +E+  ++LP  DD  AG  +    T+E+ K  L +   E +  A   A ++A++D++ +   ++IP ++ + Q RQ+    AQ L+MQ G+ L +  Q   L+       F+EN        I+  L +  + K EN+  S E++ KE+
Sbjct:  159 AVMDKDIVTIDF-EGFVDGVAFEGGKGEDYALTIGSHSFIDTFEDQLVGKNIGEDVEVNVTFPTEYHAADLAGKPALFKVKVKEIKAKELPAADDEFAGD-VSEFNTLEEYKADLKKSLTEKKDKAAKTAKEDAVVDKVIENATMEIPDAMVDTQKRQMAEDFAQRLKMQ-GLSLEQYFQFTGLNP----NTFMENLGPQALKRIQSRLVLEAVVKAENITVSVEEIDKEL 382          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_ALKMQ (Trigger factor OS=Alkaliphilus metalliredigens (strain QYMF) GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 54/212 (25.47%), Postives = 94/212 (44.34%), Query Frame = 3
Query:  105 TEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKE--FLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQRNQNL 734
            T   ++ +PGF + + G   G+    ++ FPE +  E L G +A F V   E+  ++LP LDD  A K +    T+ ++K  L  K  E  +   +Q   N +++ +   VE++IP ++ E Q   +    LL     +K     L +       KE        E+     KQ L +  I + E ++ +  D+ +E+E    + KQ    L
Sbjct:  190 TIGSNQFIPGFEEQLIGASIGDEIKVKVTFPEEYHSEELAGKEATFEVMVHEIKEKELPALDDEFA-KDVSEFDTLAELKADLSTKLEESAKKRTEQEYRNNVIEAVANQVELEIPNAVIERQINNM----LLDFDYQLKYQGMTLESYYQMTGTKEEDLRGQMREDAEKRAKQQLVLDRISEMEKIEATETDVSEELERMATQYKQELDKL 396          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_LACH4 (Trigger factor OS=Lactobacillus helveticus (strain DPC 4571) GN=tig PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.967e-13
Identity = 55/206 (26.70%), Postives = 103/206 (50.00%), Query Frame = 3
Query:  126 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEID-IPQSLFEE----QGRQLYG---AQLLQMQAGMKL---NEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 710
            +PGF D + G + G+     + FP+ +  + L G +A F  +  E+  + LPKLDD  A  +     T++++K+ + ++ ++ ++ A + A   A ++   K   +D IP ++ ++    Q  Q  G    Q +  Q   KL   NEQQL +        +F +N  E     +K NL +  I ++E L+ + E++ KE+++  AE
Sbjct:  196 IPGFEDQLIGHEAGDDVDVVVTFPKDYGAKDLAGKEAHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDELKDKIKKQLKDQKEQAANDAIQEAAIEGAVKNATVDEIPDAMIQDDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRS--------QFAKNAAER----VKTNLVLEAIVEKEGLKATKEEIDKEIKDLAAE 389          
The following BLAST results are available for this feature:
BLAST of EY661541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
TIG_STRPJ4.568e-1327.01Trigger factor OS=Streptococcus pneumoniae (strain... [more]
TIG_STRP74.568e-1327.01Trigger factor OS=Streptococcus pneumoniae (strain... [more]
TIG_STRP44.568e-1327.01Trigger factor OS=Streptococcus pneumoniae serotyp... [more]
TIG_STREM4.568e-1325.12Trigger factor OS=Streptococcus equi subsp. zooepi... [more]
TIG_STRE44.568e-1325.12Trigger factor OS=Streptococcus equi subsp. equi (... [more]
TIG_RUBXD4.568e-1323.22Trigger factor OS=Rubrobacter xylanophilus (strain... [more]
TIG_IDILO4.568e-1325.21Trigger factor OS=Idiomarina loihiensis GN=tig PE=... [more]
TIG_CLOPH4.568e-1327.71Trigger factor OS=Clostridium phytofermentans (str... [more]
TIG_ALKMQ4.568e-1325.47Trigger factor OS=Alkaliphilus metalliredigens (st... [more]
TIG_LACH45.967e-1326.70Trigger factor OS=Lactobacillus helveticus (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-034-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661541 ID=EY661541; Name=EY661541; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGCAATCGTTGATATATCAGCAACAACAATAGATGAAGAT
GAATCAAATGTTCAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTT
TGATACAGAAGATGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAA
GTGGAATTCAACGAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAA
TCCTGGAGACAAGAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGA
ATGCAGAGAACTGTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTG
CTGGAAAGCTTCTTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACA
TTATTGCAGAAGTGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGAC
TGATAATGCAATTCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTC
CTCAATCCTTGTTTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTT
TTGCAGATGCAGGCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCT
ATCAAGCCCAAAAGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACA
TAACCAATGTGATAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGT
GAAAATTTGCAGTTTTCGACTGAAGACTTAGTCAAAGAGGTTGAAAACTC
CATTGCTGAATTAAAACAACGGAACCAGAATTTGGTGGGGATTCCCGTAG
AAAACGGGTGAAAACTTCTCCAAGGAGCTAAGTTCCCGATGGTTGAAAGA
ACTGCAGAAATTCGGACTTACCCGAGGGAACTTCCCATAATTGAAAGGGG
CTTAGGTGGCAGGCCCGAATTAAAAATGCTTGCAAAGG
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