EY661528

Overview
NameEY661528
Unique NameEY661528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.090e-18
Identity = 40/101 (39.60%), Postives = 65/101 (64.36%), Query Frame = 2
Query:  407 KRFGQSPVFIAS----TLKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSDRL 697
            K+FG    FI+S      +E   +       S+++E    ++C YE+ T+WGK++GW+Y   TED++TGF++H  GW+S+YC  +  AF+G+AP NL++RL
Sbjct:  513 KKFGNLDSFISSIPIAANQERSIISPPALEESILQELSDAMACAYEDGTDWGKDVGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERL 613          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.802e-17
Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 2
Query:  404 EKRFGQSPVFIASTLKEDGGLPEGTNST-----SLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSDRL 697
            +K +G+S  F  +  +     P    +      + I EA+ V +  YE+KT WG +IGW+YG++TED++TG++MH +GW+S YC     AF G+AP NL++RL
Sbjct:  570 KKAYGKSDAFADTIPRASHPSPYAAEAAVAADEAAIAEAVMVTAAAYEKKTGWGSDIGWVYGTVTEDVVTGYRMHIKGWRSRYCSIYPHAFIGTAPINLTERL 672          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.074e-17
Identity = 34/73 (46.58%), Postives = 54/73 (73.97%), Query Frame = 2
Query:  479 NSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSDRL 697
            + T+ + E   V++C YE+ TEWG  +GW+Y   TED++TGF++H +GW+S+YC  +  AF+G+AP NL++RL
Sbjct:  529 DETAAMAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERL 601          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.244e-17
Identity = 40/111 (36.04%), Postives = 66/111 (59.46%), Query Frame = 2
Query:  377 SSLMSQKNFEKRFGQSPVFIASTL----KEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSDRL 697
            +S +   +   +FG S  F+ + L    +E    P      S+  +   + +C YE+ T WG+++GW+Y   TED++TGF+MH +GW+SVY   +  AF+G+AP NL++RL
Sbjct:  505 ASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERL 615          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.244e-17
Identity = 40/111 (36.04%), Postives = 66/111 (59.46%), Query Frame = 2
Query:  377 SSLMSQKNFEKRFGQSPVFIASTL----KEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSDRL 697
            +S +   +   +FG S  F+ + L    +E    P      S+  +   + +C YE+ T WG+++GW+Y   TED++TGF+MH +GW+SVY   +  AF+G+AP NL++RL
Sbjct:  475 ASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERL 585          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.409e-16
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:  410 RFGQSPVFIASTL----KEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSDRL 697
            +FG S   ++S L    +E    P      S+ ++   V +CGY+  T WG++ GW+Y   TED+ TGF+MH +GW+SVY   +  AF+G+AP NL++RL
Sbjct:  525 KFGASSTLVSSMLDGANQERSITPPVAIDGSVARDLAAVTACGYDLGTSWGRDAGWVYDIATEDVATGFRMHQQGWRSVYTSMEPAAFRGTAPINLTERL 624          

HSP 2 Score: 20.4014 bits (41), Expect = 4.409e-16
Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  700 QVLRWALGSVE 732
            Q+LRW+ GS+E
Sbjct:  626 QILRWSGGSLE 636          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.758e-15
Identity = 38/99 (38.38%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  410 RFGQSPVFIASTLK---EDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSDRL 697
            +FG S + + S L+   +D        +   + E   V+S  ++++T+WGK +G+IY   TEDI+TGF++H +GW+S+YC  +  AF G+AP NL++RL
Sbjct:  511 KFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERL 609          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.758e-15
Identity = 38/99 (38.38%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  410 RFGQSPVFIASTLK---EDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSDRL 697
            +FG S + + S L+   +D        +   + E   V+S  ++++T+WGK +G+IY   TEDI+TGF++H +GW+S+YC  +  AF G+AP NL++RL
Sbjct:  511 KFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERL 609          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 2
Query:  446 LKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPYNLSD 691
            LK +  + +  N+  ++  A  V  C YE  T WG +IG+ YGS+ ED  TG+++HC GW+SV+C PKR AF G +P +L D
Sbjct:  419 LKPNRIVDKPINAQDVLALAHRVAGCIYELNTNWGSKIGFRYGSLVEDYYTGYRLHCEGWRSVFCRPKRAAFCGDSPKSLID 500          
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 2
Query:  389 SQKNFEKRFGQSPVF--IASTLKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAP 676
            S K    RFG S      A  +  D       + +S I+ A  V +C Y+  T WG+E+GW+YGS+TEDILTG ++H  GW+SV  V + PAF GSAP
Sbjct:  402 SYKELHTRFGNSEELNESARNIIWDLSSKPMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAP 499          
The following BLAST results are available for this feature:
BLAST of EY661528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CSLF8_ORYSJ8.090e-1839.60Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]
CSLF6_ORYSJ1.802e-1739.81Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]
CSLF9_ORYSJ3.074e-1746.58Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CSLF2_ORYSJ5.244e-1736.04Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]
CSLF1_ORYSJ5.244e-1736.04Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]
CSLF4_ORYSJ4.409e-1640.00Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLF3_ORYSJ3.758e-1538.38Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLF3_ORYSI3.758e-1538.38Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLG3_ARATH1.093e-1443.90Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLH2_ORYSJ1.865e-1443.88Cellulose synthase-like protein H2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-034-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661528 ID=EY661528; Name=EY661528; organism=Citrus sinensis; type=EST; length=891bp
TTCTCGACCACGCGTCCGATCGGAAATTGTCTTCTTTGATATAAACATGT
TAGGCCTAGATGGGATCCAAGGGCCAGTTTATGTCGGCACAGGATGTGTC
TTCAACAGGCAGGCATTGTATGGCTATGATCCACCAGTTTCCGAAAAGAG
GCCTAAAATGACCTGCGACTGCTGGCCTTCATGGTGCTGTTGCTGCTGTG
GTGGTTCTAGGAAGTCAAAATCTAAGAAGAAGGGGGACAAGCGTGGCTTC
TTTAGCGGCTTATATACAAAGAAGAAGAAAATGATGGGGAAGAACTACGT
GAGGAAAGGATCGGCACCTGTCTTTGATCTCGAAGAGATTGAGGAAGGGC
TTGAAGGATATGATGAGTTAGAGAAATCATCACTTATGTCCCAGAAAAAC
TTCGAGAAACGGTTTGGACAGTCACCAGTTTTTATTGCTTCAACTCTCAA
GGAAGATGGTGGCCTCCCTGAAGGGACTAACAGCACATCACTTATTAAAG
AAGCCATTCATGTCATAAGTTGTGGCTATGAAGAGAAAACTGAATGGGGC
AAAGAGATTGGATGGATTTATGGTTCAATTACAGAAGATATTTTGACTGG
GTTTAAGATGCATTGTAGAGGATGGAAATCCGTGTACTGCGTGCCAAAGA
GACCAGCATTCAAGGGATCAGCTCCCTATAATCTATCAGATAGATTGCCC
AAGTTCTGAGATGGGCTCTTGGCTCTGTTGAATTTTCCTTAGTCCTCACT
GCCCATTATGGTATGGCTATGGTGGAAAGCTTGAATGGCTAAAAAGCTTT
GCTTACCCAACCACATGGTTATCCTTTCCCTCCATCCCTTACTGCCCAAT
TGAACTCTCTGGTATCGGCTTTGAATGAAAATCATCCTCCC
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