EY661528

Overview
NameEY661528
Unique NameEY661528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12
Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 2 
Query:  386 MSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHVIS-CGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAP 676
            ++++N  + FG S   + S ++     P   N+ +   EA   +  C +E +T WGK IGW+Y S  ED  T   +H RGW S Y  PK PAF G+ P
Sbjct:  393 LAEENLAREFGNSNEMVTSVVEALQRKPNPQNTLANSLEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMP 490
[Close]
BLAST of EY661528 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 2 
Query:  386 MSQKNFEKRFGQSPVFIASTLKEDGGLP-EGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAP 676
            +++++  + FG S   + S +      P    N    ++ A  +  C YE +T WGK IGW+Y S TED+ T   +H RGW S Y  P  PAF G  P
Sbjct:  393 LAEESLTREFGNSKEMVKSVVDALQRKPFPQKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMP 490
The following BLAST results are available for this feature:
BLAST of EY661528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CSLB3_ARATH2.280e-1236.73Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB4_ARATH2.521e-1135.71Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-034-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661528 ID=EY661528; Name=EY661528; organism=Citrus sinensis; type=EST; length=891bp
TTCTCGACCACGCGTCCGATCGGAAATTGTCTTCTTTGATATAAACATGT
TAGGCCTAGATGGGATCCAAGGGCCAGTTTATGTCGGCACAGGATGTGTC
TTCAACAGGCAGGCATTGTATGGCTATGATCCACCAGTTTCCGAAAAGAG
GCCTAAAATGACCTGCGACTGCTGGCCTTCATGGTGCTGTTGCTGCTGTG
GTGGTTCTAGGAAGTCAAAATCTAAGAAGAAGGGGGACAAGCGTGGCTTC
TTTAGCGGCTTATATACAAAGAAGAAGAAAATGATGGGGAAGAACTACGT
GAGGAAAGGATCGGCACCTGTCTTTGATCTCGAAGAGATTGAGGAAGGGC
TTGAAGGATATGATGAGTTAGAGAAATCATCACTTATGTCCCAGAAAAAC
TTCGAGAAACGGTTTGGACAGTCACCAGTTTTTATTGCTTCAACTCTCAA
GGAAGATGGTGGCCTCCCTGAAGGGACTAACAGCACATCACTTATTAAAG
AAGCCATTCATGTCATAAGTTGTGGCTATGAAGAGAAAACTGAATGGGGC
AAAGAGATTGGATGGATTTATGGTTCAATTACAGAAGATATTTTGACTGG
GTTTAAGATGCATTGTAGAGGATGGAAATCCGTGTACTGCGTGCCAAAGA
GACCAGCATTCAAGGGATCAGCTCCCTATAATCTATCAGATAGATTGCCC
AAGTTCTGAGATGGGCTCTTGGCTCTGTTGAATTTTCCTTAGTCCTCACT
GCCCATTATGGTATGGCTATGGTGGAAAGCTTGAATGGCTAAAAAGCTTT
GCTTACCCAACCACATGGTTATCCTTTCCCTCCATCCCTTACTGCCCAAT
TGAACTCTCTGGTATCGGCTTTGAATGAAAATCATCCTCCC
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