EY661501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: RRP3_YARLI (ATP-dependent rRNA helicase RRP3 OS=Yarrowia lipolytica GN=RRP3 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12 Identity = 36/115 (31.30%), Postives = 65/115 (56.52%), Query Frame = 2 Query: 140 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATHTEKVILAIGDFINIQAHACVGG 484 E E E +F +G+ D + + F KP+ IQ +++ ++GRD+I AQ+G+GKT+ A+ V Q++ + + + ++L+PTRELA + A+G + ++ VGG Sbjct: 55 EVDESEEQTKTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVLQSLYENPQPLYCVVLAPTRELAYQISETFEALGSAMGLRTAVVVGG 169
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: RRP3_EMENI (ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans GN=rrp3 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12 Identity = 37/105 (35.24%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 170 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATHTEKVILAIGDFINIQAHACVGG 484 SF +GI D L G++ P+ IQ +A+ ++GRDVI A++G+GKT+ AL + Q + + + + L+L+PTRELA + +G I ++ VGG Sbjct: 47 SFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALMEAPQTLFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGG 151
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: DBP8_CRYNE (ATP-dependent RNA helicase DBP8 OS=Cryptococcus neoformans GN=DBP8 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12 Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 161 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATHTEKVILAIGDFINIQAHACVGGKVSGKILGS*SMEFMWCLELRAESVI*LRGKLCVL 589 A +F+++G+ L+ + +KP+ IQ V PI+ GRD I A++G+GKT AL + + + V A++L+PTRELA + L IG + + VGG M+ LE R ++ G+LC L Sbjct: 150 ADVTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMD--------MMKQAQELEARPHIIVATPGRLCDL 284
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: DBP10_NEOFI (ATP-dependent RNA helicase dbp10 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp10 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12 Identity = 39/106 (36.79%), Postives = 67/106 (63.21%), Query Frame = 2 Query: 173 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQA--LILSPTRELATHTEKVILAIGDFINIQAHACVGG 484 F AMG+ +LL+ I + GF P+ IQ++ + I+ +DV+ A++G+GKT+ + + + + + S +V A LILSP+RELA T KV+ +G ++++ VGG Sbjct: 92 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGARGLILSPSRELALQTLKVVKELGRGTDLKSVLLVGG 197
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: DBP10_ASPTN (ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp10 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12 Identity = 38/106 (35.85%), Postives = 66/106 (62.26%), Query Frame = 2 Query: 173 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSRE--VQALILSPTRELATHTEKVILAIGDFINIQAHACVGG 484 F AMG+ +LL+ I + GF P+ IQ++ + I+ RDV+ A++G+GKT+ + + + + + S + + LILSP+RELA T KV+ +G ++++ VGG Sbjct: 91 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMDDRDVVGMARTGSGKTAAFVIPMIEKLKSHSSKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGG 196
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: DED1_CANGA (ATP-dependent RNA helicase DED1 OS=Candida glabrata GN=DED1 PE=3 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 5.150e-12 Identity = 35/101 (34.65%), Postives = 52/101 (51.49%), Query Frame = 2 Query: 158 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV-CQTVDTSSRE--------------VQALILSPTRELAT 415 EAIT F + + LL I F KP+ +Q+ +V + KGRD++A AQ+G+GKT V ++ T E A++++PTRELAT Sbjct: 142 EAITEFTSPPLDSLLLENIKLARFTKPTPVQKYSVPIVSKGRDLMACAQTGSGKTGGFLFPVLSESFLTGPAEKAANDGYSYQRKAFPTAVVMAPTRELAT 242 HSP 2 Score: 43.5134 bits (101), Expect = 5.150e-12 Identity = 19/56 (33.93%), Postives = 32/56 (57.14%), Query Frame = 1 Query: 490 VGEDIRKLEHGVHVVSGTPSRVCDMIKRKTLRTRAIKLLALDEPDEMLSRRLHDQI 657 +G +R+++HG ++ TP R+ D+++R + +K L LDE D ML QI Sbjct: 268 IGNQMREMDHGCDLLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMGFEPQI 323
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: RH41_ORYSJ (DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica GN=Os02g0201900 PE=2 SV=2) HSP 1 Score: 48.1358 bits (113), Expect = 5.170e-12 Identity = 29/116 (25.00%), Postives = 55/116 (47.41%), Query Frame = 2 Query: 158 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV---CQTVD----TSSREVQALILSPTRELATHTEKVILAIGDFINIQAHACVGG 484 + I F + G+ + L+ + G+ P+ +Q + + I R ++ A +G+GKT+ + + C V T + A++L+PTREL E+ +G + + VGG Sbjct: 134 DPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGG 249 HSP 2 Score: 43.8986 bits (102), Expect = 5.170e-12 Identity = 23/86 (26.74%), Postives = 44/86 (51.16%), Query Frame = 1 Query: 490 VGEDIRKLEHGVHVVSGTPSRVCDMIKRKTLRTRAIKLLALDEPDEMLSRRLHDQIYDGDRYLHRIFRWFEICHPSSGILEMTTNS 747 + + I ++E+G+ ++ GTP R+ D++ + + + + LDE D +L R DQ+ +IF+ + HP + T NS Sbjct: 252 LAQQIYRIENGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRDQVM-------QIFQ--ALSHPQVMMFSATVNS 328
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: SRMB_ECOLI (ATP-dependent RNA helicase srmB OS=Escherichia coli (strain K12) GN=srmB PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 5.199e-12 Identity = 36/111 (32.43%), Postives = 55/111 (49.55%), Query Frame = 2 Query: 164 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV----DTSSREVQALILSPTRELATHTEKVILAIGDFINIQAHACVGG 484 +T+F + + + LL + GF +P+AIQ A+ P + GRDV+ A +GTGKT+ L Q + S + LIL+PTRELA + ++ GG Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGG 113 HSP 2 Score: 29.261 bits (64), Expect = 5.199e-12 Identity = 14/35 (40.00%), Postives = 19/35 (54.29%), Query Frame = 1 Query: 529 VVSGTPSRVCDMIKRKTLRTRAIKLLALDEPDEML 633 +V T R+ IK + RA++ L LDE D ML Sbjct: 129 IVVATTGRLLQYIKEENFDCRAVETLILDEADRML 163
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: RRP3_CHAGB (ATP-dependent rRNA helicase RRP3 OS=Chaetomium globosum GN=RRP3 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.305e-12 Identity = 36/105 (34.29%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 170 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATHTEKVILAIGDFINIQAHACVGG 484 +F +GI D L + G++KP+ IQQ ++ ++ RD+I A++G+GKT AL + Q + + + AL+L+PTRELA + A+G I+++ +GG Sbjct: 66 TFQDLGIVDSLCDACKELGWKKPTPIQQESIPLALQDRDIIGLAETGSGKTGAFALPILQALLDKPQPLFALVLAPTRELAAQIAQSFEALGSLISLRCALILGG 170
BLAST of EY661501 vs. ExPASy Swiss-Prot
Match: RH36_ARATH (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana GN=RH36 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.305e-12 Identity = 36/106 (33.96%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 167 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATHTEKVILAIGDFINIQAHACVGG 484 T+F+ +G+ + + + G KP+ +Q V I+ GRDV+ AQ+G+GKT+ AL + + V AL+++PTRELA + A+G +N++ VGG Sbjct: 58 TNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGG 163 The following BLAST results are available for this feature:
BLAST of EY661501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 438
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661501 ID=EY661501; Name=EY661501; organism=Citrus sinensis; type=EST; length=913bpback to top |