EY661498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DEAD_MYCTU (Cold-shock DEAD box protein A homolog OS=Mycobacterium tuberculosis GN=deaD PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 71/232 (30.60%), Postives = 119/232 (51.29%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSK-IERESGVKFEHISAPQPADIAKAAGVEAAETITQ-VSDSVIPAFKSAAEE 686 Q LFSAT+P ++ +S K+L D + + + + +I + A ++V+ + + + I+F TK++ ++A+ L A A+ GD+ Q+QRE T+ R G LVAT+VAARGLD+ + ++ + P D E+Y+HR GRTGRAG +G A++ PR+ + K IE+ + P D+ + A++IT + I F+ EE Sbjct: 189 QVALFSATMPPAIRKLSAKYLH-DPFEVTCKAKTAVAENISQSYIQVARKMDALTRVLE--VEPFEA---MIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQTLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEE 414
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX17_MOUSE (Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus GN=Ddx17 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 66/176 (37.50%), Postives = 96/176 (54.55%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIR--CYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 518 QTL++SAT P V+ ++ FL+ D I+ VGN ++ A+ N+ IV C S + + ++ +TIIF ETK L + A +HGD Q +R+ L FRSGK L+AT+VA+RGLD+ DV+ +I + P E Y+HR GRT R+ N G A + P Sbjct: 272 QTLMWSATWPKEVRQLAEDFLR-DYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 445
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX17_HUMAN (Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 66/176 (37.50%), Postives = 96/176 (54.55%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIR--CYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 518 QTL++SAT P V+ ++ FL+ D I+ VGN ++ A+ N+ IV C S + + ++ +TIIF ETK L + A +HGD Q +R+ L FRSGK L+AT+VA+RGLD+ DV+ +I + P E Y+HR GRT R+ N G A + P Sbjct: 272 QTLMWSATWPKEVRQLAEDFLR-DYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 445
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DBP3_YEAST (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae GN=DBP3 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 64/186 (34.41%), Postives = 106/186 (56.99%), Query Frame = 3 Query: 3 KVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGR----TIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVS 536 K QTL+F+AT P V+ +++ F+ + K + + +++ A+ + IV + + + ++++ Y SG + +IF K+ A+++ L A+HGD+ Q QR L F+SGK L+AT+VAARGLDI +V+ +I P VE Y+HR GRTGRAG TG A L+ ++ ++ Sbjct: 287 KRQTLMFTATWPKEVRELASTFMNNPIK-VSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLA 471
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DBP3_COCIM (ATP-dependent RNA helicase DBP3 OS=Coccidioides immitis GN=DBP3 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 61/186 (32.80%), Postives = 106/186 (56.99%), Query Frame = 3 Query: 3 KVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGG----RTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVS 536 K QT++F+AT P V++++ F K+ T+ + + ++A+ ++ +V + + +++R Y GG R ++F K+ A ++ + +HGD+ Q++R +L F+SG LVAT+VAARGLDI V+L++ P +E Y+HR GRTGRAG G+A+ L+ R ++S Sbjct: 278 KRQTIMFTATWPIGVRNLAASFTKNPV-TVTIGDSSDIRANKRIKQMVEVLQPYEKDSRLLELLRRYQDGGKNNHRILVFCLYKKEAMRVERFIGSKGFKVAGIHGDMSQTERFRSLEAFKSGSISLLVATDVAARGLDIPAVKLVLNVTFPLTIEDYVHRIGRTGRAGAEGLAITLFTERDKALS 462
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DBP3_ASHGO (ATP-dependent RNA helicase DBP3 OS=Ashbya gossypii GN=DBP3 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 62/184 (33.70%), Postives = 107/184 (58.15%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGR----TIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVS 536 QTL+F+AT P V+ +++ F+++ K + + +++ A+ + +V + + + ++++ Y SG + +IF K+ AS++ L A+HGD+ Q QR L+ F++G L+AT+VAARGLDI +V+ +I P VE Y+HR GRTGRAG TGVA L+ ++ ++ Sbjct: 301 QTLMFTATWPKEVRELASTFMRAPVK-VSIGNRDELSANKRITQVVEVIDPFKKEKRLLELLKQYQSGAKKNDKVLIFALYKKEASRVERNLKYNGYNVAAIHGDLSQQQRTQALSEFKAGTANLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGATGVAHTLFTEQEKHLA 483
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DBP2_ENCCU (ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi GN=DBP2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 63/165 (38.18%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNT 491 QTL++SAT P V+ ++ ++ + + VGNE++K ++ ++ IV CS + + ++ + G + I+F K + L +L GA ALHGD Q+ R+ L FRSG+ L+AT VA RGLD+NDV+L+I + P E Y+HR GRT R GNT Sbjct: 267 QTLMWSATWPREVRGLAESYMNEYIQVV--VGNEELKTNSKIKQIVEVCSGREKEDKLIGVLDNFK-GDKVIVFCNMKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRPILIATEVAGRGLDVNDVKLVINFDFPGSCEDYVHRIGRTAR-GNT 427
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: PRP28_MAGGR (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Magnaporthe grisea GN=PRP28 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22 Identity = 67/180 (37.22%), Postives = 90/180 (50.00%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKK-TIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSV 533 QT+++SAT+P V+ I+ +LK TI +G +V S R + ++ Y +G I+F TK + +A L A LHG+ Q QRE L FR G+ LVAT+VAARGLDI DV L+I +E Y HR GRTGRAG G+A+ P V Sbjct: 466 QTVMYSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVV---SEDERRNKLRAMLNTYGTGKLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRTNVLVATDVAARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRAGKEGMAITFCGPEDHGV 642
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX43_HUMAN (Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens GN=DDX43 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22 Identity = 61/169 (36.09%), Postives = 99/169 (58.58%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLA-DLLPG---ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 503 QT++ SAT P V ++ +LK + I VG + A ++V+ ++ + + + ++ SS + I+F K A L+ DL+ G +LHGD +Q RE L F++GK L+AT++A+RGLD++DV + + PR++E Y+HR GRTGRAG TGV++ Sbjct: 422 QTVMTSATWPHSVHRLAQSYLK--EPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSI 588
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DBP3_YEAS7 (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP3 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22 Identity = 64/186 (34.41%), Postives = 106/186 (56.99%), Query Frame = 3 Query: 3 KVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGR----TIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVS 536 K QTL+F+AT P V+ +++ F+ + K + + +++ A+ + IV + + + ++++ Y SG + +IF K+ A+++ L A+HGD+ Q QR L F+SGK L+AT+VAARGLDI +V+ +I P VE Y+HR GRTGRAG TG A L+ ++ ++ Sbjct: 287 KRQTLMFTATWPKEVRELASTFMNNPIK-VSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNIAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLA 471 The following BLAST results are available for this feature:
BLAST of EY661498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661498 ID=EY661498; Name=EY661498; organism=Citrus sinensis; type=EST; length=882bpback to top |