EY661498

Overview
NameEY661498
Unique NameEY661498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: PRP5_ASPOR (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus oryzae GN=prp5 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 73/238 (30.67%), Postives = 117/238 (49.16%), Query Frame = 3
Query:    9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDII-RCYSSG----GRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSKIERESGVKFEHISAPQPADIAKA---AGVEAAETITQVSDSVIPAFKSAAEE 686
            QT+LFSAT P  ++ ++ K L    K +++V   +   +  +  IV   S   +   + +++   YS+      R +IF E +E A  L   L        ++HG   Q  R+ T+  F++G F  L+AT+VAARGLD+  ++L++  + P  +E Y+HR+GRTGRAGNTG AV      +   S                   DIAKA   +G    E + ++ DS +   K+  E+
Sbjct:  737 QTVLFSATFPRNMEALARKTLN---KPVEIVVGGRSVVAPEITQIVEVRSEDKKFIRLLELLGNLYSTDENEDARALIFVERQEGADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYS------------------VDIAKALKQSGQSVPEPVQKMVDSFLEKVKAGKEK 953          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: PRP28_NEOFI (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=prp28 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 62/198 (31.31%), Postives = 102/198 (51.52%), Query Frame = 3
Query:    9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV---------MLYDPR----KSSVSKIERE 551
            QT++++AT+PS V+ I+ K+L+  +  I  +G+      T  + + +      R + + DI+         I+F   K +   +A  +      +  LHG   Q QRE  LA  R+G    LVAT++A RG+D+ DV L++       +E+Y HR GRTGRAG +GVA+         ++YD +    KS +S++  E
Sbjct:  569 QTMMYTATMPSAVERIARKYLR--RPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEE 764          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: PRP28_ASPFU (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus fumigatus GN=prp28 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 62/198 (31.31%), Postives = 102/198 (51.52%), Query Frame = 3
Query:    9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV---------MLYDPR----KSSVSKIERE 551
            QT++++AT+PS V+ I+ K+L+  +  I  +G+      T  + + +      R + + DI+         I+F   K +   +A  +      +  LHG   Q QRE  LA  R+G    LVAT++A RG+D+ DV L++       +E+Y HR GRTGRAG +GVA+         ++YD +    KS +S++  E
Sbjct:  569 QTMMYTATMPSAVERIARKYLR--RPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEE 764          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX3_DICDI (Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum GN=ddx3 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 61/180 (33.89%), Postives = 96/180 (53.33%), Query Frame = 3
Query:    9 QTLLFSATLPSWVKHISTKFLKSDK-KTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSV 533
            QTL+FSAT P  +++++  FL +     + +VG  +   +  + ++V       ++  + D +    S G  +IF ETK S   L   L         +HGD+ Q +RE  L  FRS     LVAT++A+RGL I +V L+I  + P D+  Y+HR GRTGRAG  G+A+  ++ +   V
Sbjct:  441 QTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTTQ-NITQRIEYVV----EEDKNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENALQSFRSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNEKNKPV 615          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DBP5_MAGGR (ATP-dependent RNA helicase DBP5 OS=Magnaporthe grisea GN=DBP5 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.921e-20
Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 3
Query:    6 VQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPR--------DVEAYIHRSGRTGRAGNTGVAVMLYDPRKS--SVSKIERESGVKFEHIS 578
            +QTLLFSAT P  VK  + KF     +   +   ++      +  + + C S      +   +    + G ++IF +T+ESA ++   +        ALHG  Q  +R+  L  FRSGK   L+ TNV ARG+D++ V ++I  + P         D E Y+HR GRTGR G  GV++     RKS  ++S I    G+    +S
Sbjct:  271 IQTLLFSATFPDHVKSYAEKFAPQANQ---MKLRQQELTVKGISQMYMDCPSLKEKYEVLCKLYGLMTIGSSVIFVKTRESADEIQRRMEADGHKVSALHGAFQGQERDQLLDDFRSGKSKVLITTNVLARGIDVSSVSMVINYDIPMKGPGDQSPDAETYLHRIGRTGRFGRVGVSISFVHDRKSFTALSSIAEHYGIDLIQLS 472          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.921e-20
Identity = 62/183 (33.88%), Postives = 104/183 (56.83%), Query Frame = 3
Query:    9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSS-SARSQVIPDIIRCYSS-GGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSK 539
            QT ++SAT P  V+ ++T FL +D   ++ +G+  + A+  +  IV   S    R ++I  + +   + G + +IFT TK  A ++   L      A ++HGD QQ +R+  L  F++GK   +VAT+VA+RG+D+ D+  ++  + P + E YIHR GRTGRAG  G A+  +    S  ++
Sbjct:  299 QTCMWSATWPKEVRQLATDFL-NDYIQVN-IGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQAR 479          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: Y1688_STAEQ (Probable DEAD-box ATP-dependent RNA helicase SERP1688 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1688 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 70/234 (29.91%), Postives = 116/234 (49.57%), Query Frame = 3
Query:    9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP-RKSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQ-VSDSVIPAFKSAAEELL 692
            QT+LFSAT+P  ++ +  +F+K+ K  I  + NE      +  + ++      +     + +  +      I+F  TK    +L   L      A  LHGDI Q++R   L  F++ +   LVAT+VAARGLDI+ V  +   + P+D E+Y HR GRTGRAG  G+AV   +P     + +IE  +  + + +  P   ++ KA   +  + +   +S    P  +  + ELL
Sbjct:  177 QTMLFSATMPKAIQELVQQFMKAPK-IIKTMNNEMSDPQIDEYYTIV--KELEKFDTFTNFLDVHQPE-LAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDVNNRRMKALRPPHRKEVLKAREDDIKDRVQNWMSRENEPRLQRISSELL 406          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: Y1679_STAES (Probable DEAD-box ATP-dependent RNA helicase SE_1679 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1679 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 70/234 (29.91%), Postives = 116/234 (49.57%), Query Frame = 3
Query:    9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP-RKSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQ-VSDSVIPAFKSAAEELL 692
            QT+LFSAT+P  ++ +  +F+K+ K  I  + NE      +  + ++      +     + +  +      I+F  TK    +L   L      A  LHGDI Q++R   L  F++ +   LVAT+VAARGLDI+ V  +   + P+D E+Y HR GRTGRAG  G+AV   +P     + +IE  +  + + +  P   ++ KA   +  + +   +S    P  +  + ELL
Sbjct:  177 QTMLFSATMPKAIQELVQQFMKAPK-IIKTMNNEMSDPQIDEYYTIV--KELEKFDTFTNFLDVHQPE-LAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDVNNRRMKALRPPHRKEVLKAREDDIKDRVQNWMSRENEPRLQRISSELL 406          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: RHLB_XANOR (ATP-dependent RNA helicase rhlB OS=Xanthomonas oryzae pv. oryzae GN=rhlB PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 79/235 (33.62%), Postives = 119/235 (50.64%), Query Frame = 3
Query:    9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP--GARA--LHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKS-SVSKIER--ESGVKFEHISAPQPADIAKAA--GVEAAETITQVSDSVIPAFKSAAEE 686
            QTLLFSATL   V  ++ + +   +K +  V  E + A+   + I  P     ++ ++  + R  S G RT++F  TK    ++A  L   G R   L GD+ Q +RE  L  F+ G+   LVAT+VAARGL I+ V+ +   + P D E Y+HR GRT R G  G A+     R + S+  IE   E  +  E +++     + +AA   VE  E   +  DSV   F+ A E+
Sbjct:  194 QTLLFSATLSHRVLELAYEHMNEPEKLV--VETETITAARVRQRIYFPSDDEKQTLLLGLLSR--SEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAARVPVEGEEADDEAGDSVGTIFREAREQ 424          
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: RH21_ARATH (DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana GN=RH21 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 62/170 (36.47%), Postives = 95/170 (55.88%), Query Frame = 3
Query:   12 TLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSA--RSQVIPDIIRCYSSGGRT-IIFTETKESASQLADLLPGA----RALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVA 500
            T +FSAT+P  V+ ++ K+L++    +  +G          +H+++   S    R Q + D +     G +T I+F  TK++   +A  L  A      LHG   Q QRE++L GFR+ ++  LVAT+V  RG+DI DV  +I  + P+ +E Y HR GRTGRAG +GVA
Sbjct:  514 TYMFSATMPPGVERLARKYLRNP--VVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDEL-----GEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVA 676          
The following BLAST results are available for this feature:
BLAST of EY661498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PRP5_ASPOR2.237e-2030.67Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP28_NEOFI2.237e-2031.31Pre-mRNA-splicing ATP-dependent RNA helicase prp28... [more]
PRP28_ASPFU2.237e-2031.31Pre-mRNA-splicing ATP-dependent RNA helicase prp28... [more]
DDX3_DICDI2.237e-2033.89Probable ATP-dependent RNA helicase ddx3 OS=Dictyo... [more]
DBP5_MAGGR2.921e-2031.71ATP-dependent RNA helicase DBP5 OS=Magnaporthe gri... [more]
DBP2_NEOFI2.921e-2033.88ATP-dependent RNA helicase dbp2 OS=Neosartorya fis... [more]
Y1688_STAEQ3.815e-2029.91Probable DEAD-box ATP-dependent RNA helicase SERP1... [more]
Y1679_STAES3.815e-2029.91Probable DEAD-box ATP-dependent RNA helicase SE_16... [more]
RHLB_XANOR3.815e-2033.62ATP-dependent RNA helicase rhlB OS=Xanthomonas ory... [more]
RH21_ARATH3.815e-2036.47DEAD-box ATP-dependent RNA helicase 21 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661498 ID=EY661498; Name=EY661498; organism=Citrus sinensis; type=EST; length=882bp
ATAAAGTTCAAACACTTCTCTTCAGTGCCACCTTGCCAAGCTGGGTGAAG
CATATTTCCACCAAGTTTCTTAAATCAGACAAGAAAACCATAGATCTTGT
TGGCAATGAGAAAATGAAGGCTAGTACCAATGTCCGGCATATTGTTCTTC
CTTGTTCTAGTTCAGCGAGATCTCAAGTCATTCCTGATATCATTCGTTGT
TATAGCAGTGGAGGCCGAACTATTATTTTCACCGAGACAAAGGAAAGTGC
TTCTCAGCTTGCTGACTTGCTGCCTGGTGCACGGGCTTTACATGGGGACA
TACAGCAGTCTCAACGTGAGGTGACACTTGCTGGGTTCAGGTCAGGAAAG
TTCATGACATTAGTTGCCACAAATGTGGCGGCACGGGGTTTGGACATTAA
TGATGTGCAGTTAATTATTCAGTGTGAGCCTCCTCGTGATGTAGAAGCCT
ATATACATCGATCTGGACGTACTGGAAGAGCAGGCAATACTGGAGTTGCT
GTAATGCTTTATGATCCTAGAAAGTCAAGTGTATCTAAGATAGAAAGAGA
ATCTGGTGTGAAATTTGAGCACATATCTGCTCCACAGCCAGCTGATATTG
CCAAGGCTGCAGGTGTGGAAGCTGCTGAAACAATAACCCAAGTTTCTGAT
AGTGTAATTCCCGCTTTCAAGTCCGCTGCTGAGGAGCTGTTGAATAATTC
TGGTCTATCAGCAGCAGAGCTGCTTGCAAAAGCACTAGCCAAGGCTGTAG
GTTATACTGAGATAAAGAGTAGATCACTTCTTAGTTCTTTGGAGGATCAT
GNTACAGTGGTTCTTGAAAGCAGAAGCCCATCTACCACCATCCTTTGCTT
TTTGTGTCTGAGAGATTCTTGCCCTGAGAAAA
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