EY661498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.937e-26 Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSK----IERESGVK 563 QTL +SAT P V+ +S KFL + K I +G+ +KA+ +R IV S S + + ++ G R ++F +TK+ Q+ L A ++HGD Q++R+ L+ FRSGK + AT+VAARGLD+ DV+ +I + P +E Y+HR GRTGRAG G A + + +K I +E+G K Sbjct: 279 QTLYWSATWPKEVEQLSKKFLYNPYKVI--IGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQK 469
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX4_XENLA (Probable ATP-dependent RNA helicase DDX4 OS=Xenopus laevis GN=ddx4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.937e-26 Identity = 71/183 (38.80%), Postives = 108/183 (59.02%), Query Frame = 3 Query: 3 KVQTLLFSATLPSWVKHISTKFLKSDKK--TIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSV 533 K QTL+FSAT P ++ +++ +LKS+ + LVG A ++V VL + + + + +I++ S RT+IF TK+ A +A L + ++HGD +Q QRE L FR+GK +V T VAARGLDI +VQ +I + P++V+ Y+HR GRTGR GNTG A ++ + V Sbjct: 460 KRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGG----ACSDVAQTVLEMRENGKMEKLLEILKS-SEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGKCTVIVCTAVAARGLDIENVQHVINYDVPKEVDEYVHRIGRTGRCGNTGKATSFFNVQDDHV 637
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX4_MACFA (Probable ATP-dependent RNA helicase DDX4 OS=Macaca fascicularis GN=DDX4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.937e-26 Identity = 68/173 (39.31%), Postives = 104/173 (60.12%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 515 QTL+FSAT P ++ ++ +FLKS+ + + + A +V+ VL ++ + + +I+R RT++F ETK+ A +A L + ++HGD +Q +RE L FR GK LVAT+VAARGLDI +VQ +I + P ++ Y+HR GRTGR GNTG A+ +D Sbjct: 477 QTLMFSATFPEEIQRLAAEFLKSNYLFVAV--GQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFD 646
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DED1_ASPCL (ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus GN=ded1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.037e-25 Identity = 70/174 (40.23%), Postives = 100/174 (57.47%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDK-KTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 515 QTL+FSAT P ++ ++ FLK ++ VG+ + V ++ + V+ DI+ + + G T+IF ETK A L+D L R A+HGD Q +RE L FRS + LVAT VAARGLDI +V +I + P D++ Y+HR GRTGRAGNTG+A ++ Sbjct: 387 QTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYV----EDVDKRSVLLDILHTHGTSGLTLIFVETKRMADALSDFLINQRFPATAIHGDRTQRERERALEMFRSARCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFN 556
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX4_HUMAN (Probable ATP-dependent RNA helicase DDX4 OS=Homo sapiens GN=DDX4 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 1.037e-25 Identity = 68/173 (39.31%), Postives = 104/173 (60.12%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 515 QTL+FSAT P ++ ++ +FLKS+ + + + A +V+ VL ++ + + +I+R RT++F ETK+ A +A L + ++HGD +Q +RE L FR GK LVAT+VAARGLDI +VQ +I + P ++ Y+HR GRTGR GNTG A+ +D Sbjct: 476 QTLMFSATFPEEIQRLAAEFLKSNYLFVAV--GQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFD 645
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DED1_SCHPO (ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe GN=ded1 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.354e-25 Identity = 72/182 (39.56%), Postives = 102/182 (56.04%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDK-KTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSK 539 QTL+FSAT P ++ ++ FLK ++ VG+ S N+ V+ S + + DI+ G T+IF ETK A L D L A ++HGD Q +RE L FRSG+ +VAT VA+RGLDI +V +I + P D++ Y+HR GRTGRAGNTG AV ++ ++K Sbjct: 366 QTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGS----TSENITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAK 543
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX4_BOVIN (Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus GN=DDX4 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.354e-25 Identity = 68/178 (38.20%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSS 530 QTL+FSAT P ++ ++ +FLKS+ + + + A +V+ +L ++ + + +I+R RT++F ETK+ A +A L + ++HGD +Q +RE L FR GK LVAT+VAARGLDI +VQ +I + P ++ Y+HR GRTGR GNTG A+ +D S Sbjct: 478 QTLMFSATFPEEIQRLAGEFLKSNYLFVAV--GQVGGACRDVQQTILQVGQYSKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDS 652
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX4_MOUSE (Probable ATP-dependent RNA helicase DDX4 OS=Mus musculus GN=Ddx4 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 2.309e-25 Identity = 68/173 (39.31%), Postives = 102/173 (58.96%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 515 QTLLFSAT P ++ ++ FLKS + + + A +V+ +L ++ + + +I+R RT++F ETK+ A +A L + ++HGD +Q +RE L FR GK LVAT+VAARGLDI +VQ +I + P ++ Y+HR GRTGR GNTG A+ +D Sbjct: 449 QTLLFSATFPEEIQRLAGDFLKSSYLFVAV--GQVGGACRDVQQTILQVGQYSKREKLVEILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFD 618
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: CSHA_BACHK (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis subsp. konkukian GN=cshA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.309e-25 Identity = 75/237 (31.65%), Postives = 123/237 (51.90%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKS-SVSKIERESGVKFEHISAPQPADIAKAAGVEAAETI-TQVSDSVIPAFKSAAEELLNNS 701 QTLLFSAT+P ++ I+ +F+ + + K N++ L + V+ ++ S I+F TK +L++ L A +HGD+ Q++R L F+ G LVAT+VAARGLDI+ V + + P+D E+Y+HR GRTGRAG G+A++ PR+S + IER + K + + AP + + AE + + + + + +K AEE+L + Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQH---IKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEEN 409
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: CSHA_BACCZ (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ZK / E33L) GN=cshA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.309e-25 Identity = 75/237 (31.65%), Postives = 123/237 (51.90%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKS-SVSKIERESGVKFEHISAPQPADIAKAAGVEAAETI-TQVSDSVIPAFKSAAEELLNNS 701 QTLLFSAT+P ++ I+ +F+ + + K N++ L + V+ ++ S I+F TK +L++ L A +HGD+ Q++R L F+ G LVAT+VAARGLDI+ V + + P+D E+Y+HR GRTGRAG G+A++ PR+S + IER + K + + AP + + AE + + + + + +K AEE+L + Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQH---IKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPE-LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEEN 409 The following BLAST results are available for this feature:
BLAST of EY661498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661498 ID=EY661498; Name=EY661498; organism=Citrus sinensis; type=EST; length=882bpback to top |