EY661495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.326e-34 Identity = 76/198 (38.38%), Postives = 109/198 (55.05%), Query Frame = 1 Query: 175 SKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGL-NRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCK-------INTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASR 744 S S V V FGA GDG DDT AF +AWK AC+ + ++ G F I SGPCK L ++ G ++ P P+ W N+ +WL F R++ T G GT+ G GQ+WW CK +++ PC +PT I F N++V+ L + NS Q H+ F C V+I+ +++ +P SPNTDGIH+ +R Sbjct: 74 SDSGCVFDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGV-VLAPEGGVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHRGPDGSSSSGPCA-SPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTR 269 HSP 2 Score: 26.5646 bits (57), Expect = 1.326e-34 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 759 DSIVGTGDDCISIG 800 +S+V GDDCISIG Sbjct: 275 NSVVSNGDDCISIG 288
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.185e-32 Identity = 71/188 (37.77%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 181 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSR-LTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISAS 741 S + V FGA GDG DD++AF AW+ CS + V AG TF++ P+ G CKS + +++ G +VAP + WKG ++ +W+ F + L ++G G ING G WW PTA+ F C NL++ L ++S HI + C V IS+L++ AP SPNTDGI + AS Sbjct: 20 SSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGN-WKG-DKDQWILFTDIEGLVIEGDGEINGQGSSWWEHKGS---------RPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGAS 196 HSP 2 Score: 25.409 bits (54), Expect = 1.185e-32 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 759 DSIVGTGDDCISIGGNS 809 D I+ TGDDCI+I + Sbjct: 203 DCIIATGDDCIAINSGT 219
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.612e-32 Identity = 73/188 (38.83%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 190 VIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCK-INTTNPC--RHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASR 744 V V +GA GDG +D T+AF W AC+ + +V A F+++ + GPC+ + K+ GTI A DP WK N + W++F R+ + G G I+G G WWS CK IN C + PTAI K++ V+ L + NS + H+ F C V I +K+ AP +SPNTDGI I AS+ Sbjct: 59 VFNVEHYGAVGDGKHDSTDAFEKTWNAACNKLSAVFLV-PANKKFVVNNLVFYGPCQPHFSFKVDGTIAAYPDPAKWK--NSKIWMHFARLTDFNLMGTGVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASK 243 HSP 2 Score: 26.1794 bits (56), Expect = 2.612e-32 Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 768 VGTGDDCISIGGNS 809 +GTGDDC+++G S Sbjct: 252 IGTGDDCVAVGTGS 265
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.332e-30 Identity = 67/187 (35.83%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 175 SKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHIS 735 S + V + FGA GDG + +AF N W + C P ++ G TFL P+ +GPCKS++T+ + GTI+A G W F RV++L + G GT +G G+ W ++ C PT++ F KN+++ + VN++ H+ V I N+K+ APAESPNTDGIH+S Sbjct: 46 SGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKG-TFLAGPVIFAGPCKSKVTVNVIGTIIATTS-----GYATPEWFLFERVDNLVLTGTGTFHGKGEAVW-KADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLS 225 HSP 2 Score: 28.8758 bits (63), Expect = 2.332e-30 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 759 DSIVGTGDDCISIGGNSH 812 DS + TGDDC+S+G S+ Sbjct: 234 DSTIATGDDCVSVGRGSN 251
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.955e-28 Identity = 70/184 (38.04%), Postives = 96/184 (52.17%), Query Frame = 1 Query: 199 VGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSR-LTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 V GAK DG D T+AF +AW KAC+ I AG TF + + SGPCK+ +T +I+GT+VAP D V N W++F+ VN +T+ GG ++G G W+ CK C T + F N+ V L +NSQ HI + V + ++V SPNTDGIH+ S G Sbjct: 30 VASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAG-TFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIG--NAANWIFFHHVNGVTISGG-ILDGQGTALWA--CKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSG 207 HSP 2 Score: 25.409 bits (54), Expect = 5.955e-28 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 759 DSIVGTGDDCISIG 800 +S + TGDDC+SIG Sbjct: 212 NSKIATGDDCVSIG 225
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.389e-27 Identity = 71/225 (31.56%), Postives = 112/225 (49.78%), Query Frame = 1 Query: 73 VLIHVLVCLSASLVSTEGFDSLLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 + + +L+ +SAS V ++ FD V FGAK DG D ++ F +AWK+AC+ + +V G T+L+ +++ GPCK+ + + + GTI AP DP +K N W+ F V + + GGG +G G + ++ N + P I F N +Q++ +S+ HI C + + LK+ AP ESPNTDGIH+ S G Sbjct: 11 MFVLLLLFISASKVQSDAFD---------------------VVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKG-TYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPN---WVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSK-LPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 209 HSP 2 Score: 24.6386 bits (52), Expect = 6.389e-27 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 762 SIVGTGDDCISIG 800 S + TGDDCISIG Sbjct: 215 SDIKTGDDCISIG 227
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.082e-26 Identity = 71/225 (31.56%), Postives = 111/225 (49.33%), Query Frame = 1 Query: 73 VLIHVLVCLSASLVSTEGFDSLLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 + + +L+ +SAS V + FD V FGAK DG D ++ F +AWK+AC+ + +V G T+L+ +++ GPCK+ + + + GTI AP DP +K N W+ F V + + GGG +G G + ++ N + P I F N +Q++ +S+ HI C + + LK+ AP ESPNTDGIH+ S G Sbjct: 11 MFVLLLLFISASKVQPDAFD---------------------VVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKG-TYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPN---WVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSK-LPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 209 HSP 2 Score: 24.6386 bits (52), Expect = 1.082e-26 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 762 SIVGTGDDCISIG 800 S + TGDDCISIG Sbjct: 215 SDIKTGDDCISIG 227
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.409e-26 Identity = 57/179 (31.84%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 211 GAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 GA G+G D T+A AW AC + I+ G FL+ P++ +GPCK +T++++G ++A D +K + W+ RV++L + G G ++G G WS++ + + C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S G Sbjct: 47 GASGNGKTDSTKAVQEAWASACGGTGKQTILIPKG-DFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYK--DHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYD-CKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSG 221 HSP 2 Score: 27.7202 bits (60), Expect = 1.409e-26 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 756 SDSIVGTGDDCISIG 800 +++++G GDDCISIG Sbjct: 225 TNTVIGVGDDCISIG 239
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.410e-26 Identity = 68/202 (33.66%), Postives = 104/202 (51.49%), Query Frame = 1 Query: 136 LLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISAS 741 LL L H G ++T V + +GA + D +EA NA+K+AC + + IV G TF ++ + + GPCKS L L+I T+ AP DP L WL N+++ T+ GGG ++G W CK + C P ++F+ N ++++ ++S+ H+ C + V APA SPNTDGIH+S S Sbjct: 13 LLFLAHFGESQTG-----VFDITKYGANSNA--DISEALLNAFKEACQSTSPSTIVIPKG-TFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQ---LKVGEWLTVNKLDQFTMSGGGILDGQAAAAWE--CK--QSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRS 199 HSP 2 Score: 26.1794 bits (56), Expect = 1.410e-26 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 756 SDSIVGTGDDCISIG 800 +DS TGDDCIS+G Sbjct: 205 TDSNFSTGDDCISVG 219
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.837e-26 Identity = 67/191 (35.08%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 181 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCK-SRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRS-CKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 S V V D+GAKG G D ++A AWK AC+ + ++ G + + + + GPCK S++ +I G + AP DP +K W+ F R++ LTV G GT++G GQ W+++ C N C+HA + F K+ V+++ +NS+ HI C + ++ V AP S NTDGIH+ S+G Sbjct: 6 SGSVFNVNDYGAKGAG--DISQAVMKAWKAACASQGPSTVLIPKG-NYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSKFKSDG---WVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPN--CKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKG 188 HSP 2 Score: 25.7942 bits (55), Expect = 1.837e-26 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 768 VGTGDDCISIGGNS 809 + TGDDCISIG S Sbjct: 196 IATGDDCISIGPGS 209 The following BLAST results are available for this feature:
BLAST of EY661495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661495 ID=EY661495; Name=EY661495; organism=Citrus sinensis; type=EST; length=835bpback to top |