EY661495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.331e-25 Identity = 56/179 (31.28%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 211 GAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 GA G+G D T+A AW AC + I+ G FL+ ++ +GPCK +T+++ G ++A D +K W+ RV++L + G G ++G G WS++ C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S G Sbjct: 47 GASGNGKTDSTKAVQEAWASACGGTGKQTILIPKG-DFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK--EHGNWIEILRVDNLVITGKGNLDGQGPAVWSKN-SCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSG 221 HSP 2 Score: 27.7202 bits (60), Expect = 3.331e-25 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 756 SDSIVGTGDDCISIG 800 +++++G GDDCISIG Sbjct: 225 TNTVIGVGDDCISIG 239
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.335e-25 Identity = 56/179 (31.28%), Postives = 95/179 (53.07%), Query Frame = 1 Query: 211 GAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 GA G+G D T+A AW AC + I+ G FL+ ++ +GPCK +T+++ G ++A D +K + W+ RV++L + G G ++G G WS++ C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S G Sbjct: 47 GASGNGKTDSTKAVQEAWASACGGTGKQTILIPKG-DFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK--DHGNWIEILRVDNLVITGKGNLDGQGPAVWSKN-SCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSG 221 HSP 2 Score: 27.7202 bits (60), Expect = 4.335e-25 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 756 SDSIVGTGDDCISIG 800 +++++G GDDCISIG Sbjct: 225 TNTVIGVGDDCISIG 239
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.107e-24 Identity = 60/179 (33.52%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 208 FGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSR-LTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISAS 741 +GAK DG D T+AF AW AC+ T I+ G + + + CK ++++I+G+IVAP+D + + + W++F V +++ GG ++ G W CK N + C ++ F N+K+ L +NSQ+ HI N V I +KV A SPNTDGIH+ +S Sbjct: 38 YGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIA--SSKHWIWFEDVTDVSIYGG-ILDAQGTSLWK--CKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESS 211 HSP 2 Score: 29.261 bits (64), Expect = 2.107e-24 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 756 SDSIVGTGDDCISIGGNS 809 ++S +GTGDDCISIG S Sbjct: 217 TNSRIGTGDDCISIGPGS 234
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.856e-24 Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 190 VIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINT---TNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISAS 741 V+ + FG K + +D +A +AW +AC+ KIV AG T+ ++ I++ GPCK+ + L++ GTI AP DP V KG +W F ++HLT+ G G +G G + ++ + N F+ N V+ + +S+ H+ C + + AP +SPNTDGIH+ S Sbjct: 24 VLDISKFGGKPN--SDIGQALTSAWNEACASTTAAKIVIPAG-TYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKG--TEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKS 205 HSP 2 Score: 28.1054 bits (61), Expect = 7.856e-24 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 768 VGTGDDCISIGGNS 809 +GTGDDC+SIG S Sbjct: 215 IGTGDDCVSIGDGS 228
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.329e-23 Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 1 Query: 157 GSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTI-NGMGQ-EWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 G+ + +K + V GAKGD DD+ AFA AWK+AC+ A + I G +++ ++ GPCK +TL+++G AP K W+ F + T+ G I +G G W + C T C P I F N K+ ++ NS+ H+ NC + +S++ + AP ES NTDGIHI S G Sbjct: 58 GAKVSGAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACA--AGSTITVPKG-EYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKP--HAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCA--KTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNG 249 HSP 2 Score: 23.8682 bits (50), Expect = 1.329e-23 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 768 VGTGDDCISIG 800 + TGDDC+SIG Sbjct: 257 IKTGDDCVSIG 267
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.426e-22 Identity = 54/171 (31.58%), Postives = 88/171 (51.46%), Query Frame = 1 Query: 235 DDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 D T+A AWK+AC+ + + I+ G F + I + GPCKS + L++ GT+ AP DP KGL W+ N+++ LT+ GGG +G G+ W ++ C+ + + N ++++ ++S+ H+ C + K+ A S NTDGIHI S G Sbjct: 1 DSTQALTTAWKEACASASPSTILVPKG-NFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLG---WINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDG 167 HSP 2 Score: 24.6386 bits (52), Expect = 1.426e-22 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 768 VGTGDDCISIGGNS 809 + TGDDCIS+G S Sbjct: 175 IKTGDDCISLGDGS 188
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.664e-21 Identity = 53/180 (29.44%), Postives = 90/180 (50.00%), Query Frame = 1 Query: 208 FGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747 F A G +D T A A+ AC PA ++++ G F + ++GPCKS + + G + D + RW+ F ++N + GGGT +G G W + + T C+ P ++ F N +++++ ++++ H + + N+K+IAPAESPNTDGIH+ G Sbjct: 25 FTAGGPPNSDITAAVLKAFTSACQAPAPSQVLIPKG-DFKLGETVMTGPCKSPIEFTLQGNVKT----DGGSTQGKDRWVVFEKINGFKLNGGGTFDGEGNAAWKAN-NCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEG 198 HSP 2 Score: 24.6386 bits (52), Expect = 5.664e-21 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 768 VGTGDDCISIG 800 + TGDDCIS+G Sbjct: 206 IATGDDCISVG 216 The following BLAST results are available for this feature:
BLAST of EY661495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661495 ID=EY661495; Name=EY661495; organism=Citrus sinensis; type=EST; length=835bpback to top |