EY661488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR2_MOUSE (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.791e-23 Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 471 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISEKIAG 872 S+ +K R+ IPV YP FNFVG+LLGPRGNSLKR++ TG ++ I GKGS++D KE++LR G Y HL+D LH+LIE P R+ A E I++ L V + D I+++Q RE++ LN E G Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFL--VPDYNDEIRQEQLRELSYLNGSEESGRG 187
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR2_RAT (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.951e-23 Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 471 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISEKIAG 872 S+ +K R+ IPV YP FNFVG+LLGPRGNSLKR++ TG ++ I GKGS++D KE++LR G Y HL+D LH+LIE P R+ A E I++ L V + D I+++Q RE++ LN E G Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFL--VPDYNDEIRQEQLRELSYLNGSEESGRG 187
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR2_HUMAN (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.446e-23 Identity = 60/128 (46.88%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 471 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848 S+ +K R+ IPV YP FNFVG+LLGPRGNSLKR++ TG ++ I GKGS++D KE++LR G Y HL+D LH+LIE P R+ A E I++ L V + D I+++Q RE++ LN Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFL--VPDYNDEIRQEQLRELSYLN 179
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR2_DANRE (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.209e-22 Identity = 58/128 (45.31%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 471 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848 S+ +K R+ IPV YP FNFVG+LLGPRGNS+KR++ TG ++ I GKGS++D KE++LR G Y HL++ LH+LIE P R+ A E I++ L V + D I+++Q RE++ LN Sbjct: 54 SNKNIKLSERVLIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFL--VPDYNDEIRQEQLRELSYLN 179
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR2_XENTR (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21 Identity = 57/128 (44.53%), Postives = 82/128 (64.06%), Query Frame = 3 Query: 471 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848 S+ +K R+ IPV YP FNFVG+LLGPRGNSLKR++ TG ++ I GKGS++D KE++LR + HL+D LH+L+E P R+ A E I++ L V + D I+++Q RE++ LN Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAHLSDELHVLLEVFAPPGEAYSRMSHALEEIKKFL--VPDYNDEIRQEQLRELSYLN 179
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR3_RAT (KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.141e-19 Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 507 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISE 860 IPV +P FNFVG+LLGPRGNSLKR++ T ++ I GKGS++D KE++LR G Y HLND LH+LIE P R+ A E I++ L + + D I++ Q +E+ LN SE Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFL--IPDYNDEIRQAQLQELTYLNGGSE 179
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR3_MOUSE (KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.141e-19 Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 507 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISE 860 IPV +P FNFVG+LLGPRGNSLKR++ T ++ I GKGS++D KE++LR G Y HLND LH+LIE P R+ A E I++ L + + D I++ Q +E+ LN SE Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFL--IPDYNDEIRQAQLQELTYLNGGSE 179
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR3_HUMAN (KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.141e-19 Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 507 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISE 860 IPV +P FNFVG+LLGPRGNSLKR++ T ++ I GKGS++D KE++LR G Y HLND LH+LIE P R+ A E I++ L + + D I++ Q +E+ LN SE Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFL--IPDYNDEIRQAQLQELTYLNGGSE 179
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR1_CHICK (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.321e-19 Identity = 52/127 (40.94%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISEKIAG 872 R+ IPV YP FNFVG++LGP+GN++KR++ TG ++ + GKGS++D KE++LR G P Y HLN LH+ IE P + A E +++ L V + D I ++Q E++ LN + E G Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFL--VPDMMDDICQEQFLELSYLNGVPEPTRG 266
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR1_RAT (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.338e-19 Identity = 52/127 (40.94%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISEKIAG 872 R+ IPV YP FNFVG++LGP+GN++KR++ TG ++ + GKGS++D KE++LR G P Y HLN LH+ IE P + A E +++ L V + D I ++Q E++ LN + E G Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFL--VPDMMDDICQEQFLELSYLNGVPEPSRG 283 The following BLAST results are available for this feature:
BLAST of EY661488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661488 ID=EY661488; Name=EY661488; organism=Citrus sinensis; type=EST; length=897bpback to top |