EY661488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR1_MOUSE (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 4.338e-19 Identity = 52/127 (40.94%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISEKIAG 872 R+ IPV YP FNFVG++LGP+GN++KR++ TG ++ + GKGS++D KE++LR G P Y HLN LH+ IE P + A E +++ L V + D I ++Q E++ LN + E G Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFL--VPDMMDDICQEQFLELSYLNGVPEPSRG 283
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: KHDR1_HUMAN (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.338e-19 Identity = 52/127 (40.94%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLNQISEKIAG 872 R+ IPV YP FNFVG++LGP+GN++KR++ TG ++ + GKGS++D KE++LR G P Y HLN LH+ IE P + A E +++ L V + D I ++Q E++ LN + E G Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFL--VPDMMDDICQEQFLELSYLNGVPEPSRG 283
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: BBP_CANAL (Branchpoint-bridging protein OS=Candida albicans GN=BBP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.648e-18 Identity = 51/129 (39.53%), Postives = 80/129 (62.02%), Query Frame = 3 Query: 468 PSSYT--VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848 PS+Y + + RL +PV YP+ NFVG L+GPRGN+LK+++ +G R+ IRGKGS+K+ D + D LH+LI AD P I ++ EII++L+ + + +++KR Q +E+A+LN Sbjct: 139 PSNYRRPSRTVERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDGFGSSQTGTDIQDDLHVLITADSPLKI-SKAVKLVNEIIDKLIFS-PQGMNFMKRDQLKELAVLN 265
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: BBP_DICDI (Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.925e-17 Identity = 67/209 (32.06%), Postives = 107/209 (51.20%), Query Frame = 3 Query: 225 QVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSN-LMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848 Q+ + RL EI + + P + F + DR R SP P +N SN + + +L P+ K+ ++ IP+ +P +NF+G ++GPRGN+ KR+E +G ++ IRGKGS +D K KL+ + ND LH+L+ AD VD +L +A+ ++ E L V+E ++ KRQQ RE+A +N Sbjct: 91 QIAALILRLRVDEITKKITIGPIE-FTERDRERSPSPPPTYDNNGKRSNTREQRIKEKLQKERHQLVVTAQQINPTYKPPSDYQPPNEKKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRD-GKPTKLQFQE-----NDELHVLLTAD----TVD-QLDKAEVLVREFLIPVEEGKNEHKRQQLRELAEMN 287
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: BBP_ASHGO (Branchpoint-bridging protein OS=Ashbya gossypii GN=BBP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.925e-17 Identity = 48/114 (42.11%), Postives = 72/114 (63.16%), Query Frame = 3 Query: 507 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848 IP++ YP NFVG LLGPRGN+LK+++ +GC++ IRG+GS+K+ L G ++N+PLH +I AD I + + + II + + T E Q+ KR Q RE+A+LN Sbjct: 155 IPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEGKAATDL--PKGAMNMNEPLHCVISADTEEKI-PLGINAGESIIIKAI-TFPEGQNDFKRGQLRELAVLN 264
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: BBP_ASPFU (Branchpoint-bridging protein OS=Aspergillus fumigatus GN=bbp PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.543e-16 Identity = 52/147 (35.37%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 468 PSSYT--VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLN---DPLHILIEADLPANIVDIRLRQAQEIIEELLKT---VDESQDYIKRQQXREVAMLNQISEKIAGAKCQ 884 PS Y K ++ +PV+ YP NF+G L+GPRGN+LK++EA +G ++ IRGKGS+K+ +GR H + + LH LI AD + ++ +A++++ +++T + E Q+ +KR Q RE+A LN CQ Sbjct: 172 PSDYRRPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKEG------KGRSDAAHASNQEEDLHCLIMAD-----TEEKVNKAKKLVHNVIETAASIPEGQNELKRNQLRELAALNGTLRDDENQACQ 307
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: BBP_NEUCR (Branchpoint-bridging protein OS=Neurospora crassa GN=bpb-1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16 Identity = 52/147 (35.37%), Postives = 83/147 (56.46%), Query Frame = 3 Query: 468 PSSYT--VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLN---DPLHILIEADLPANIVDIRLRQAQEIIEELLKT---VDESQDYIKRQQXREVAMLNQISEKIAGAKCQ 884 PS Y K ++ +PV+ YP NF+G L+GPRGN+LK++E +G ++ IRGKGS+K+ +GR H + + LH LI AD + ++ +A+++I +++T + E Q+ +KR Q RE+A LN CQ Sbjct: 187 PSDYRRPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEG------KGRSDAAHSSNQEEDLHCLIMAD-----TEEKVNKAKKLIHNIIETAASIPEGQNELKRNQLRELAALNGTLRDDENQACQ 322
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: BBP_CANGA (Branchpoint-bridging protein OS=Candida glabrata GN=BBP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16 Identity = 72/227 (31.72%), Postives = 113/227 (49.78%), Query Frame = 3 Query: 201 HQKL-----GPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSA--PASPSSYTVKRILRLE----IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848 HQKL GP T + +C+ I +S ++ + F + R+RSPSP + + G + L +++L ++ S P + KR + IPV YP NFVG LLGPRG +L++++ +GC++ IRG+GS+K+ L PG +DPLH LI AD I + ++ + I+ + + T E Q+ +KR Q RE+A LN Sbjct: 33 HQKLPTKISGPLT-LEQLCAYQHMFRIQEISSIIKSHSF-EVPNARNRSPSPPP----VYDAEGKRINTREQLYKKKLMNERFKLVEVVSKLIPGYSAPKDYKRPTTFQEKYYIPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSSDL--PPGAMDFSDPLHCLIIADNEEKI-ENGIKACRNIVIKAV-TSPEGQNELKRGQLRELAELN 249
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: BBP_YEAST (Branchpoint-bridging protein OS=Saccharomyces cerevisiae GN=MSL5 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16 Identity = 48/114 (42.11%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 507 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848 IPVD YP+ NFVG LLGPRG +L++++ + C++ IRG+GS+K+ L PG + DPLH LI AD + + ++ Q I+ + + T E Q+ +KR Q RE+A LN Sbjct: 154 IPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGAMNFEDPLHCLIIAD-SEDKIQKGIKVCQNIVIKAV-TSPEGQNDLKRGQLRELAELN 263
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: BBP_SCHPO (Branchpoint-bridging protein OS=Schizosaccharomyces pombe GN=bpb1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15 Identity = 52/146 (35.62%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 465 SPSSYT--VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYE-HLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKT---VDESQDYIKRQQXREVAMLNQISEKIAGAKCQ 884 +PS Y K ++ +PV YP NF+G L+GPRG++LK +EA +G ++ IRGKGS+ KE K R P ++ + LH L+ AD + ++ A ++I+ +++T V E Q+ +KR Q R++A LN CQ Sbjct: 176 APSDYRRPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSV----KEGKGRSDPSVRGNMEEDLHCLVTAD-----SEDKINHAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATLNGTLRDDENQVCQ 312 The following BLAST results are available for this feature:
BLAST of EY661488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661488 ID=EY661488; Name=EY661488; organism=Citrus sinensis; type=EST; length=897bpback to top |