EY661487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP421_ARATH (Pentatricopeptide repeat-containing protein At5g46680 OS=Arabidopsis thaliana GN=At5g46680 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12 Identity = 44/160 (27.50%), Postives = 80/160 (50.00%), Query Frame = 3 Query: 18 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ-LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 494 LC ++ +A L+ + V+P+ +N +I GY R + A+++ M G+ +V T+N+LI + + L EML G+ PD+++YN L+ LG A + L++++ G+ P I TY L+ C G+ A E+F +++ Sbjct: 23 LCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182 HSP 2 Score: 72.4034 bits (176), Expect = 3.954e-12 Identity = 45/176 (25.57%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 66 MLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS-LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKARDIHQK 590 M E + P+ +N +I G + L+ + D ML G+S +++++N L+ + G +AF L +++ L G+ P + TYN+L+ A C GH A++L+ + R + P+++TY LI G C + + + +++ G + + + + K Y K K + K Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12 Identity = 46/157 (29.30%), Postives = 72/157 (45.86%), Query Frame = 3 Query: 30 GDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 500 G + A + M ++ V P+ H ++++I Y G +A + M + V N F F+ L+ G F + KEM G+ PD YN++I + A+ +D ML GI PD +T+ LI HC G AEE+F ++ G Sbjct: 353 GPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP380_ARATH (Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 3 Query: 12 QGLCIHGD---IVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 485 + LC H ++KA E L S K E ++++I + G + +++ M G++ +V +NALI A + I A L EM ++G ++ TYN+LI G +L+L+D+ML RGI PD Y LI+G C ++ A EVF K Sbjct: 370 KNLCRHDKSDHLIKAYELLSS---KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP241_ARATH (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 44/174 (25.29%), Postives = 87/174 (50.00%), Query Frame = 3 Query: 30 GDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSN--AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 545 G KA+E + +M ++ VP+ +N +I + G L+ A + D++ + G+ + T+N L+ A +R ++ A + ++M PD++TYN +I G A +L+ E+ +G PD +TY L+ N ++ +EV+ ++Q +G D + + + Y Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412 HSP 2 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 45/183 (24.59%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 57 LLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-----GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKARDIHQK 590 + + E +V ++N ++ Y R G S A + D M G ++ +FN LI A + G + +++ LLD G+ PD TYN L+ A ++ A++++++M PD+ TY +I + G EAE +F +++ G D + + L + + + K ++++Q+ Sbjct: 213 IFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE---LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392 HSP 3 Score: 68.9366 bits (167), Expect = 4.371e-11 Identity = 48/187 (25.67%), Postives = 82/187 (43.85%), Query Frame = 3 Query: 30 GDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML-LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKARDIHQ 587 G +A + + K P+ +N ++Y + R + + M G + T+N +I + G + A L K+M L G PD TY +LI + A L EML GI P + TY+ LI G+ G +EAE+ F+ + G D++ + ++ E+ KA +++ Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.808e-12 Identity = 39/164 (23.78%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 12 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 503 Q LC + +A + + M + + ++ G+ + G + + + D M+ G+ + T+ +++A + S + L ++M PD+ YN++I +C LG + A++L++EM G++P + T+ +I G ++G + EA + F ++ T GL Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.808e-12 Identity = 41/160 (25.62%), Postives = 79/160 (49.38%), Query Frame = 3 Query: 45 AREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 524 A E + E ++ V+I +G+CG LS A + + M + G +V+ +NAL+ + G I +A SL ++M +G D+ ++N+++ G A+++++ + GI PD +TY L+ G +EA + +++ G D I + Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITY 622
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.808e-12 Identity = 40/137 (29.20%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 105 NVIIY-----GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 500 NV+IY G+G+ G + A+ I + ++ G++ N++T+N+L+ A + I +A + M P+ TY +LI C + + A + EM ++G+ P I+YT +I G GN+ EA +F + + G Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792 HSP 2 Score: 67.781 bits (164), Expect = 9.739e-11 Identity = 47/195 (24.10%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 6 RPQGLCIHGDIVKAR------EFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKA 572 R + IHG ++KA E SM E+ V + +N++I G+ +CG ++ A+ + + M + G V T+ ++I + + +A+ L +E I +V Y+ LI +G I A + +E++++G+TP++ T+ L+ + EA F ++ L + + + IL +++ +KA Sbjct: 553 RSYSILIHG-LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PPR40_ARATH (Pentatricopeptide repeat-containing protein At1g13040, mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11 Identity = 43/164 (26.22%), Postives = 79/164 (48.17%), Query Frame = 3 Query: 42 KAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 533 K F++ +E + ++ +I + R + A+ + + M G+ NV T+ +LI A R G+ A L +M G+ PD Y ++ C G++ A ++++M+ ITPD I+Y LI G C G + EA ++F ++ D + F+ + Sbjct: 308 KCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11 Identity = 40/145 (27.59%), Postives = 68/145 (46.90%), Query Frame = 3 Query: 66 MLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 500 MLE P+ +N++++ R G + + D M G S + +T+N L+ +G A + M GI P V Y LI G++ DEM++ G PD++ YT +I G+ G + +A+E+F ++ G Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11 Identity = 47/174 (27.01%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 15 GLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 533 GLC + +A + ML+ V P HI+ +I + G+LS AF ++D + + ++ LI + + G + + +EM G PD TYN+LI C A ++ DEM+ +G+ PD+I+Y ++ +EA +F + G + D + +RI+ Sbjct: 196 GLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369 The following BLAST results are available for this feature:
BLAST of EY661487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661487 ID=EY661487; Name=EY661487; organism=Citrus sinensis; type=EST; length=899bpback to top |