EY661487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11 Identity = 48/191 (25.13%), Postives = 88/191 (46.07%), Query Frame = 3 Query: 15 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKARDIHQ 587 G C G + F+ M E V ++N +I G+ D + LM V ++V T++ ++ A + G + A + KEM+ G+ PD Y++L A +L + ++ P+++ +T +I G C+ G+M +A VF K+ G++ + F L Y +K+ KA ++ Q Sbjct: 269 GYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKGPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ 458
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP287_ARATH (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11 Identity = 41/146 (28.08%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 66 MLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 503 M + P+ + ++I YGR A S+ + ML GV +N L+ A G + A ++ K M D IFPD+++Y ++ A N + A + + + G P+I+TY LIKG+ ++++ EV+ K++ G+ Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PPR46_ARATH (Putative pentatricopeptide repeat-containing protein At1g16830 OS=Arabidopsis thaliana GN=At1g16830 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11 Identity = 43/152 (28.29%), Postives = 75/152 (49.34%), Query Frame = 3 Query: 126 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKARDI 581 G GDL + M+ G N F ++ R G + +AF + M+ GI V +++L+ G A+ L+++M++ G +P+++TYT LIKG G + EA V +K+Q+ GLA D + ++ Y + +AR + Sbjct: 188 GGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKV 339 HSP 2 Score: 68.1662 bits (165), Expect = 7.457e-11 Identity = 34/144 (23.61%), Postives = 73/144 (50.69%), Query Frame = 3 Query: 21 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 452 C G + +A + + M+ + ++W++++ G+ R G+ A + + M+ G S N+ T+ +LI G + +AF++ ++ +G+ PD+ NL+I LG A +++ + +R + PD T+ ++ C G Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP443_ARATH (Pentatricopeptide repeat-containing protein At5g62370 OS=Arabidopsis thaliana GN=At5g62370 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11 Identity = 51/189 (26.98%), Postives = 86/189 (45.50%), Query Frame = 3 Query: 18 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-RILKKRYRTMKESHKARDI 581 LC D A + +M E + P I++ II G+ G + A ML G+ + + +I R G I +A L +E++ + P FTY +LI +G + Q D+ML G++P+++ YT LI +G+ K + +F + + DHI + +L +R M K + I Sbjct: 557 LCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVI 745
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP161_ARATH (Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11 Identity = 45/167 (26.95%), Postives = 78/167 (46.71%), Query Frame = 3 Query: 87 PEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKARDIHQ 587 P+ ++N I+ G+ S A + M GV + T+N LI ++ G + +A K M+ G PD TY L+ C G AL L +EM RG P+ TY L+ G C M + E++ +++ G+ ++ + L R++ +S K + ++ Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL---VRSLVKSGKVAEAYE 426 HSP 2 Score: 68.1662 bits (165), Expect = 7.457e-11 Identity = 43/153 (28.10%), Postives = 73/153 (47.71%), Query Frame = 3 Query: 12 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLS-FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 467 + LC G + +A++ + + EK P+ + +N ++ +C DL + D M F V ++ +F LI ++ +A L ++ G PD F YN ++ C L A+ +Y +M G+ PD ITY LI G G ++EA Sbjct: 167 RSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP107_ARATH (Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidopsis thaliana GN=At1g66345 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11 Identity = 43/159 (27.04%), Postives = 73/159 (45.91%), Query Frame = 3 Query: 36 IVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 512 I ++ L +L K++V + +++++Y + GDL +A + D ML G S+N F + + G + +A L EM G+ P T+N LIG G L+ + M+ RG+ P + E++K N+ A E+ K G D Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPD 443
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PPR34_ARATH (Pentatricopeptide repeat-containing protein At1g11710, mitochondrial OS=Arabidopsis thaliana GN=At1g11710 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11 Identity = 47/185 (25.41%), Postives = 84/185 (45.41%), Query Frame = 3 Query: 27 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM-LRRG--ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKA 572 +GD A E + + H N + ++ + + M S G NV TFN +I + + +F+A S+ ML G++P+V ++N++I +C G + ALQL +M + G ++P+ +TY +I G C G + AE + + G+ + + L Y S +A Sbjct: 161 NGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP130_ARATH (Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana GN=At1g77405 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11 Identity = 47/170 (27.65%), Postives = 77/170 (45.29%), Query Frame = 3 Query: 30 GDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLML--SFGVSSNVFTFNALILAETRGGS-----------IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 500 G + +A M E P+ + +N II R G+ A + D M F + +T+ LI + R G +++A + +EML G PDV TYN LI C I AL+L+++M +G P+ +TY I+ + ++ A E+ ++ LG Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP297_ARATH (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11 Identity = 49/197 (24.87%), Postives = 90/197 (45.69%), Query Frame = 3 Query: 15 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIYGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRTMKESHKARDIHQKWLLRN 605 G IHG I++ + + + ++ +I Y + G L A + D+M + N+ +N+L+ + + DA +L M +GI PD T+N L LG AL + +M +G+ P+++++T + G GN + A +VF K+Q G+ + L K + H +++H L +N Sbjct: 244 GKAIHGYILRNQLWY----------DVYVETTLIDMYIKTGYLPYARMVFDMM----DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
BLAST of EY661487 vs. ExPASy Swiss-Prot
Match: PP139_ARATH (Pentatricopeptide repeat-containing protein At2g01390 OS=Arabidopsis thaliana GN=At2g01390/At2g01380 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11 Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 3 Query: 123 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 533 +G G + + +S+ LM GV + T+ +LI + G + A L +EM +G P V +Y + G + A ++Y EMLR ++P+ TYT L++ A G +EA ++F K+Q +G+ D IL Sbjct: 132 FGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNIL 268 The following BLAST results are available for this feature:
BLAST of EY661487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661487 ID=EY661487; Name=EY661487; organism=Citrus sinensis; type=EST; length=899bpback to top |