EY661483
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY661483 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.346e-22 Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 3 Query: 162 RASLDANVSDMSVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFV--NQGGEIGELDFRFPIGAPLHGIRAFLSTNQLKTYDKARNALALALSPVVKALVDPDGALXDIRDLDSISFSDWFLSKGGTQTSIQRNVDPVAYALWFIDCD 818 R LD V+ + F P + L++ I GAGL G+STA L D GH+ + E+R +GGKV ++ D G+ E GLH+FFG Y N+ L ++G + L K+H+ F ++ GE DF + APL+GI A L N++ T+ + + A+ L P + G + D IS DW +G ++ AL FI+ D Sbjct: 83 RPELDNTVNYLEAAFLSSTFRASPRPTK--PLEIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFSEALPAPLNGILAILKNNEMLTWPE-KVKFAIGLLPAML------GGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPD 294
BLAST of EY661483 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSJ (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica GN=PDS PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 7.346e-22 Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 255 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFV--NQGGEIGELDFRFPIGAPLHGIRAFLSTNQLKTY-DKARNALALALSPVVKALVDPDGALXDIRDLDSISFSDWFLSKG 749 L+V I GAGLAG+STA L D GH+ + E+R +GGK+ ++ D+ G+ E GLH+FFG Y N+ L ++G + L K+H+ F N+ GE DF + APL+GI A L N++ T+ +K + AL L + V G + D + S+W +G Sbjct: 105 LQVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPAMV--------GGQAYVEAQDGFTVSEWMKKQG 264
BLAST of EY661483 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSI (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica GN=PDS1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 7.346e-22 Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 255 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFV--NQGGEIGELDFRFPIGAPLHGIRAFLSTNQLKTY-DKARNALALALSPVVKALVDPDGALXDIRDLDSISFSDWFLSKG 749 L+V I GAGLAG+STA L D GH+ + E+R +GGK+ ++ D+ G+ E GLH+FFG Y N+ L ++G + L K+H+ F N+ GE DF + APL+GI A L N++ T+ +K + AL L + V G + D + S+W +G Sbjct: 105 LQVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPAMV--------GGQAYVEAQDGFTVSEWMKKQG 264
BLAST of EY661483 vs. ExPASy Swiss-Prot
Match: CRTI_ARATH (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.637e-21 Identity = 66/191 (34.55%), Postives = 102/191 (53.40%), Query Frame = 3 Query: 255 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFV--NQGGEIGELDFRFPIGAPLHGIRAFLSTNQLKTY-DKARNALALALSPVVKALVDPDGALXDIRDLDSISFSDWFLSKGGTQTSIQRNVDPVAYALWFIDCD 818 LKV I GAGLAG+STA L D GH+ + E+R +GGK+ ++ D+ G+ E GLH+FFG Y N+ L ++G + L K+H+ F ++ GE DF + APL+GI A L N++ T+ +K + A+ L + V G + D +S +W +G + ++ AL FI+ D Sbjct: 93 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPEKIKFAIGLLPAMV--------GGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPD 275
BLAST of EY661483 vs. ExPASy Swiss-Prot
Match: CRTI_SYNE7 (Phytoene dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.791e-21 Identity = 68/190 (35.79%), Postives = 104/190 (54.74%), Query Frame = 3 Query: 255 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFVNQGGEIGELD-FRFP-IGAPLHGIRAFLSTNQLKTYDKARNALALALSPVVKALVDPDGALXDIRDLDSISFSDWFLSKGGTQTSIQRNVDPVAYALWFIDCD 818 ++VAI GAGLAG+S A L D GH +YE R +GGKV ++ D+ G+ E GLH+FFG Y N+ +L K++ + L K H+ F NQ + G F FP I AP++G+ A LS N + T+++ + L L P A++ + ++D S+++W + + +A AL FID D Sbjct: 1 MRVAIAGAGLAGLSCAKYLADAGHTPIVYERRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNMLQLFKELNIEDRLQWKSHSMIF-NQPTKPGTYSRFDFPDIPAPINGVAAILSNNDMLTWEE-KIKFGLGLLP---AMIRGQSY---VEEMDQYSWTEWLRKQNIPERVNDEVFIAMAKALNFIDPD 182
BLAST of EY661483 vs. ExPASy Swiss-Prot
Match: CRTI_SOYBN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max GN=PDS1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.219e-21 Identity = 64/190 (33.68%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 255 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFV--NQGGEIGELDFRFPIGAPLHGIRAFLSTNQLKTYDKARNALALALSPVVKALVDPDGALXDIRDLDSISFSDWFLSKGGTQTSIQRNVDPVAYALWFIDCD 818 L + I GAGLAG+STA L D GH+ + E+R +GGKV ++ DK G+ E GLH+FFG Y + L ++G + L K+H+ F N+ GE DF + +PL+GI A L N++ T+ + + A+ L P + G + D +S +W +G + ++ AL FI+ D Sbjct: 99 LNIVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYPYVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLTWPE-KVKFAIGLLPAML------GGQPYVEAQDGLSVQEWMKKQGVPERVADEVFIAMSKALNFINPD 281
BLAST of EY661483 vs. ExPASy Swiss-Prot
Match: CRTI_MAIZE (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.122e-21 Identity = 59/168 (35.12%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 255 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFV--NQGGEIGELDFRFPIGAPLHGIRAFLSTNQLKTY-DKARNALALALSPVVKALVDPDGALXDIRDLDSISFSDWFLSKG 749 L+V + GAGLAG+STA L D GH+ + E+R +GGKV ++ D+ G+ E GLH+FFG Y N+ L ++ + L K+H+ F N+ GE DF + AP++GI A L N++ T+ +K + A+ L + V G + D ++ S+W +G Sbjct: 97 LQVVVAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELRIEDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPINGIWAILRNNEMLTWPEKVKFAIGLLPAMV--------GGQPYVEAQDGLTVSEWMKKQG 256
BLAST of EY661483 vs. ExPASy Swiss-Prot
Match: CRTI_SYNY3 (Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=pds PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.927e-18 Identity = 66/192 (34.38%), Postives = 106/192 (55.21%), Query Frame = 3 Query: 255 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFVNQGGEIGELD-FRFP-IGAPLHGIRAFLSTNQLKTY-DKARNALALALSPVVKALVDPDGALXDIRDLDSISFSDWFLSKGGTQTSIQRNV-DPVAYALWFIDCD 818 ++V I GAGLAG++ A L D G + E R +GGK+ ++ D+ G+ E GLH+FFG Y N+ +L K++ + L K+H+ F NQ + G F FP I AP++G+ A L N + T+ +K R L L + A+V + ++D ++S+W ++K I++ V ++ AL FID D Sbjct: 1 MRVVIAGAGLAGLACAKYLADAGFTPVVLERRDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNMLQLFKELDIEDRLQWKEHSMIF-NQPEKPGTYSRFDFPDIPAPINGLVAILRNNDMLTWPEKIRFGLGL-----LPAIVQGQSY---VEEMDKYTWSEW-MAKQNIPPRIEKEVFIAMSKALNFIDPD 182 The following BLAST results are available for this feature:
BLAST of EY661483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661483 ID=EY661483; Name=EY661483; organism=Citrus sinensis; type=EST; length=912bpback to top |