EY661479

Overview
NameEY661479
Unique NameEY661479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.201e-16
Identity = 61/181 (33.70%), Postives = 89/181 (49.17%), Query Frame = 1
Query:    4 LKAYYYSKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-----APVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTG-GDELVHLVRWVHSVVREEWTAEVFDVELLR 528
            L  Y    +E+L+VY+Y   GS+  +LH  +  G I L+W                        ++H ++KSSN+ L+      VSD G+  + SA+        +A   GY  PE   S + +   DVYS+GVVLLE+LTGK P  +   GD   +LV WV    + + T +VFD ELL+
Sbjct:  947 LLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIG-IKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDN--NLVGWVKLHAKGKIT-DVFDRELLK 1123          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.541e-16
Identity = 52/183 (28.42%), Postives = 94/183 (51.37%), Query Frame = 1
Query:    4 LKAYYYSKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGL--------TTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKS--PIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 522
            L+ +  +  E+L+VY Y + GSV++ L  ER   + PLDW T                     K++H ++K++NI L+ +    V D GL        T +T+A+   I    G+ APE   + K+++ +DV+ +G++LLE++TG+    +     D+ V L+ WV  +++E+    + D +L
Sbjct:  362 LRGFCMTPTERLLVYPYMANGSVASCLR-ERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI----GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDL 539          

HSP 2 Score: 26.5646 bits (57), Expect = 1.541e-16
Identity = 11/36 (30.56%), Postives = 22/36 (61.11%), Query Frame = 3
Query:  522 VEISHIEEEMVEMLQIAMSCVVRMPDQRPKCLXV*R 629
            ++ ++ E E+ +++Q+A+ C    P +RPK   V R
Sbjct:  539 LQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVR 574          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.563e-16
Identity = 55/171 (32.16%), Postives = 82/171 (47.95%), Query Frame = 1
Query:   22 SKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA------------PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPI--HTTGGDELVHLVRWVHSVVREE 492
            +++ KL+ YDY   GS+S+ LHG    G +  DW+                       ++HG++K+ N+ L       ++D GL    S               P +A + GY APE    ++ T+ SDVYS+GVVLLE+LTGK P+     GG    HLV+WV   + E+
Sbjct:  823 NRNLKLLFYDYLPNGSLSSRLHGAGKGGCV--DWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGG---AHLVKWVRDHLAEK 988          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.563e-16
Identity = 56/174 (32.18%), Postives = 82/174 (47.13%), Query Frame = 1
Query:    4 LKAYYYSKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----SALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 513
            L  Y   K++KL++Y Y   GS+   LH E+ +G   LDW T                      ++H +IKSSNI L+      ++D GL  +     + +   +    GY  PE   +  AT   DVYSFGVVLLE+LTG+ P+          L+ WV  +  E+  +E+FD
Sbjct:  802 LLGYCNYKNDKLLIYSYMDNGSLDYWLH-EKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFD 974          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.959e-16
Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 1
Query:   22 SKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT--SALAP----VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 522
            ++D KL+VY+Y   GS+  +LH  +G     L W T                      +VH +IKS+NI ++      V+D G+      +  AP    VIA + GY APE   + +  + SD+YSFGVV+LEI+T K P+    G++   LV+WV S + ++    V D +L
Sbjct:  756 TRDCKLLVYEYMPNGSLGDLLHSSKGG---MLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELGEK--DLVKWVCSTLDQKGIEHVIDPKL 923          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.783e-16
Identity = 51/179 (28.49%), Postives = 90/179 (50.28%), Query Frame = 1
Query:    4 LKAYYYSKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----SALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKS--PIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 522
            L+ +  +  E+L+VY Y + GSV++ L  ER EG   LDW                       K++H ++K++NI L+ +    V D GL  +     S +   +    G+ APE   + K+++ +DV+ +GV+LLE++TG+    +     D+ + L+ WV  V++E+    + D EL
Sbjct:  354 LRGFCMTPTERLLVYPYMANGSVASCLR-ERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAEL 531          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.543e-16
Identity = 51/172 (29.65%), Postives = 83/172 (48.26%), Query Frame = 1
Query:   22 SKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI--TSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVR-EEWTAEVFDVELLR 528
            ++D  +++Y+Y   GS+  +LHG         +W                        +VH ++K SNI L++     V+D G+  +  T     V+A + GY APE   + +  + SD+YS+GV+LLEI+TGK  +    G E   +V WV S ++ +E   EV D  + R
Sbjct:  790 NRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFG-EGNSIVDWVRSKLKTKEDVEEVLDKSMGR 960          

HSP 2 Score: 30.4166 bits (67), Expect = 9.543e-16
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 3
Query:  531 SHIEEEMVEMLQIAMSCVVRMPDQRP 608
            S I EEM +ML+IA+ C  R P  RP
Sbjct:  963 SLIREEMKQMLRIALLCTSRSPTDRP 988          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.649e-16
Identity = 50/183 (27.32%), Postives = 93/183 (50.82%), Query Frame = 1
Query:    4 LKAYYYSKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGL--------TTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKS--PIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 522
            L+ +  +  E+L+VY Y + GSV++ L  ER   ++PL W                       K++H ++K++NI L+ +    V D GL        T +T+A+   I    G+ APE   + K+++ +DV+ +G++LLE++TG+    +     D+ V L+ WV  +++E+    + D +L
Sbjct:  365 LRGFCMTPTERLLVYPYMANGSVASCLR-ERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTI----GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDL 542          

HSP 2 Score: 26.9498 bits (58), Expect = 9.649e-16
Identity = 11/36 (30.56%), Postives = 22/36 (61.11%), Query Frame = 3
Query:  522 VEISHIEEEMVEMLQIAMSCVVRMPDQRPKCLXV*R 629
            ++ ++ E E+ +++Q+A+ C    P +RPK   V R
Sbjct:  542 LQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVR 577          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 58/190 (30.53%), Postives = 88/190 (46.32%), Query Frame = 1
Query:    4 LKAYYYSK-DEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT------SALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPT*RKRW 552
            L+ YY    D +L+VYDY   G++S +L     +    L+W                        +VHG+IK  N+  ++     +SD GL  +T      SA+        GY +PE T S + T+ SD+YSFG+VLLEILTGK P+  T  ++   +V+WV   ++     E+ +  LL        W
Sbjct:  900 LRGYYAGPPDLRLLVYDYMPNGNLSTLLQEASHQDGHVLNWPMRHLIALGIARGLGFLHQS---NMVHGDIKPQNVLFDADFEAHISDFGLDRLTIRSPSRSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPVMFTQDED---IVKWVKKQLQRGQVTELLEPGLLELDPESSEW 1083          
BLAST of EY661479 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 1
Query:    4 LKAYYYSKDEKLMVYDYYSLGSVSAMLHGERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV-HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKA--TQASDVYSFGVVLLEILTGKSPIH--TTGGDELVHLVRWVHSVVREEWTAEVFDVEL 522
            L AYYY ++EKL+V ++    S+++ LH     G   LDW T                       + HG++KSSNI L+      ++D  L  + S+        A Y++PE   S+    T+ +DV+ FGV++LE+LTG+ P +  T G D  + LV WV+ +V+E+ T +VFD E+
Sbjct:  434 LVAYYYRREEKLLVTEFMPNSSLASHLHANNSAG---LDWITRLKIIKGVAKGLSYLFDELPTLTIPHGHMKSSNIVLDDSFEPLLTDYALRPMMSSEHAHNFMTA-YKSPEYRPSKGQIITKKTDVWCFGVLILEVLTGRFPENYLTQGYDSNMSLVTWVNDMVKEKKTGDVFDKEM 607          
The following BLAST results are available for this feature:
BLAST of EY661479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
BRI1_SOLLC1.201e-1633.70Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
SERK1_ARATH1.541e-1628.42Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
Y4265_ARATH4.563e-1632.16Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA4.563e-1632.18Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
HSL1_ARATH5.959e-1632.95Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
SERK4_ARATH7.783e-1628.49Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5148_ARATH9.543e-1629.65Probable leucine-rich repeat receptor-like protein... [more]
SERK2_ARATH9.649e-1627.32Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y4361_ARATH1.016e-1530.53Probable LRR receptor-like serine/threonine-protei... [more]
Y1061_ARATH1.016e-1533.15Probably inactive leucine-rich repeat receptor-lik... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661479 ID=EY661479; Name=EY661479; organism=Citrus sinensis; type=EST; length=903bp
GAGCTGAAGGCATATTATTATTCCAAAGATGAGAAGCTTATGGTTTATGA
TTATTACAGTCTGGGAAGTGTCTCTGCTATGCTACACGGTGAGAGAGGAG
AAGGTAGAATCCCTCTAGATTGGGATACTCGAATGAGGATAGCTATAGGT
GCTGCAAGAGGAATAGCTCGGATCCATGCAGCGAATGGTGGGAAGCTAGT
CCATGGCAACATCAAGTCCTCGAACATCTTTCTCAACTCCCAACAGTATG
GTTGTGTGTCTGATCTTGGTCTGACAACTATTACAAGTGCTCTAGCCCCA
GTTATTGCCCGTGCCGCTGGTTACCGTGCCCCAGAAGTGACAGATTCCCG
GAAAGCAACTCAGGCTTCTGATGTATACAGCTTTGGAGTAGTCCTACTTG
AGATCCTTACTGGGAAATCCCCCATCCATACTACTGGTGGTGATGAACTT
GTTCACTTGGTCAGATGGGTTCATTCAGTAGTTCGAGAGGAGTGGACAGC
AGAAGTATTCGATGTAGAGTTGTTGAGATATCCCACATAGAGGAAGAGAT
GGTCGAGATGTTACAAATTGCAATGTCTTGTGTTGTACGTATGCCAGATC
AAAGACCAAAATGCCTGATNGTGTAAAGGGATAGAAAATGTTAGGCCCAA
TGACTCGGAGAAATCGCCATCTTCTGGAAACAGGCTGAAAGTCAACACCT
CCTTCACGGGTGCCGGGAGAGACTAAATTAATTCTTCGAGTGGAGGAATC
CATAGCAATTTCCCTTTCCTTTCCTTTTTTTGGGCTGATTTTGACCCCTT
CTGGGGTGCTGCAAATTATCCTGCCAAGGATTCCCCGCCAATCTTTAAAA
GGTGGTACCGAAATTTCCCCCTGGGAAACCCCGGTTTCCTTTGAAACTTG
GCC
back to top