EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_OCHA4 (60 kDa chaperonin OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=groL PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.735e-55
Identity = 118/240 (49.17%), Postives = 169/240 (70.42%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA--XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG +  + DLG+ +E  +++ LG A+KV+I K++TTI+  A  K EI AR++Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++AL APA  I  NA              ASE T GYN    ++ ++++AGV+DP KV R ALQNAASVAG+++TT+A++ E
Sbjct:  288 MLEDIAILTGGQVISEDLGIKLETVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVSQIKQQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASAKISA---KGINADQEAGINIVRRALQAPARQITTNAGEEASVIVGKILENASE-TYGYNTANGEFGDLIKAGVVDPVKVVRTALQNAASVAGLLITTEAMIAE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_GEOUR (60 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groL PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.735e-55
Identity = 110/239 (46.03%), Postives = 166/239 (69.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIA++TG +  + ++G  +ENT+++ LG A+K+T+ KD+TTII  A S+ EIQ R+  ++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATE E++++K R+EDA +AT AA++EGIVPGGG A +     +    D L+   +++ G +++++AL  P   IA NA              +   GYNA  D+Y +M+QAG+IDP KV+R ALQNA+S+AG++LTT+A++ +
Sbjct:  287 MLEDIAVLTGGKVISEEIGFKLENTTMDMLGQAKKITVDKDNTTIIDGAGSEAEIQGRVKMIRAQIEETTSDYDREKLQERLAKLVGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVDEGIVPGGGVAYLRAMSAL----DSLDLSTEQQFGVNVIKRALEEPIRQIAQNAGVDGSIVVDKVKNGKDAFGYNAADDEYVDMIQAGIIDPTKVSRSALQNASSIAGLMLTTEAMIAD 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_ANADF (60 kDa chaperonin 1 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.735e-55
Identity = 120/245 (48.98%), Postives = 168/245 (68.57%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIA +TG    A +LG+ +E  +V+ LG A+++TI K++TTI+     +++I+ARI Q++ ++ ET S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA +AT AA+EEGIVPGGG A +     + A+K KLE  + D+R G  IVQKAL  PA  IA NA              +   G+NA ++ +E++ +AGVIDP KV+R ALQNAASVA ++LTT+A+V E    K
Sbjct:  288 MLKDIATLTGGNVVAEELGIKLEQLTVKDLGRAKRITIDKENTTIVDGEGKREDIEARIKQIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRA---LQALK-KLEVPEGDQRFGVAIVQKALEYPARRIAENAGWDGAVVVSRINDGKAAHGFNAASEVFEDLEKAGVIDPTKVSRTALQNAASVASLLLTTEAMVAEKPKKK 528          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_SHEWM (60 kDa chaperonin OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=groL PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55
Identity = 116/238 (48.74%), Postives = 162/238 (68.07%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG    A ++GL +E  ++E LGTA++V I KD TTII     +D+IQAR+AQ+K +  E+ S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++  +  +  ++ + D++ G  I  +A+ AP   IA NA                  GYNA  D Y +ML+ G++DP KVTR ALQ AAS+AG+++TT+A+V E
Sbjct:  288 MLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGTGEQDQIQARVAQIKVQAEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIADV--EVINEDQKHGVVIALRAMEAPLRQIATNAGEESSVVANNVKNGSGNYGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVGE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_RICM5 (60 kDa chaperonin OS=Rickettsia massiliae (strain Mtu5) GN=groL PE=3 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55
Identity = 117/250 (46.80%), Postives = 166/250 (66.40%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +++DIAI+T  E    DLG+ +EN S++ LGTA++VTI K++T I+     K  I+ R+ Q+K ++AET S YD EKL ER+AKLSGGVAV+KVG ATE E+++RK R+EDA  AT AA+EEG+V GGG  L+H S   P  K K+E+ D++ G +IV +AL  P   I  NA               +   G+NA   +Y +M++AG+IDPAKV R ALQ+AASVA +++TT+ ++V+  S K   P+P
Sbjct:  288 MMEDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQ--PLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDESSDKEE-PMP 534          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PSYWF (60 kDa chaperonin OS=Psychrobacter sp. (strain PRwf-1) GN=groL PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55
Identity = 110/238 (46.22%), Postives = 167/238 (70.17%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG    + ++G+ +E  ++EQLGTA+KVT+ K++T I+  A +K +I+AR+  + +++ E+ S YD EKL ER+AKLSGGVAVIKVGAATET ++++K R++DA +AT AA+EEG+VPGGG ALV   + +  +K   ++ D+  G +I+++A+ AP   I  NA                  GYNA T  Y +ML+ G++DPAKV+R AL++AASVAG++LTT+A++ +
Sbjct:  287 MLQDIAILTGGTVISEEVGMSLETATIEQLGTAKKVTVGKENTVIVDGAGNKADIEARVESINRQIEESTSDYDKEKLQERVAKLSGGVAVIKVGAATETAMKEKKDRVDDALHATRAAVEEGVVPGGGVALVRALNALADLKG--DNEDQNAGINILRRAMEAPLRQIVTNAGDEASVVVNEVKNGSGNYGYNAATGVYGDMLEMGILDPAKVSRSALEHAASVAGLMLTTEAMITD 522          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_ALCBS (60 kDa chaperonin OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=groL PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55
Identity = 112/238 (47.06%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG    + ++GL +EN S+E LGTA+KV I K++TTI+  A  + +I  R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIK+GAATE E++++K R++DA +AT AA+EEG+VPGGG ALV    +V  IK   ++ ++  G  +  +AL  P   IA+NA              +   GYNA + +Y +ML+ G++DPAKVTR ALQ AAS+AG+++TT+A+V +
Sbjct:  287 MLQDIAILTGGTVISEEVGLSLENASLEDLGTAKKVNIDKENTTIVDGAGQQADIDGRVEQIRKEIENSSSDYDKEKLQERVAKLAGGVAVIKIGAATEIEMKEKKARVDDALHATRAAVEEGVVPGGGVALVRALANVGTIKG--DNDEQNAGIALTFRALEMPLRQIAYNAGAEASVIVQEVRNGKGNYGYNAASGEYGDMLEMGILDPAKVTRSALQAAASIAGLMITTEAMVAD 522          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_SYNS9 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9902) GN=groL2 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55
Identity = 115/242 (47.52%), Postives = 165/242 (68.18%), Query Frame = 1
Query:   19 LQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            L DIAI+TG    + D  + ++  ++E LG AR+VTI K+STTI+A+    + +  R+A +K+EL  T+S YD EKL ERIAKL+GGVAVIKVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG+ L+ L++ + A+  +L D D+R G +IVQ++L AP   IA NA             S    G+NA+T  YE+++  G++D  KV R A+Q+A S+A +++TT+ ++ +   P+
Sbjct:  287 LADIAILTGGTLISEDQAMTLDKVTLEDLGHARRVTISKESTTIVANDNHSEAVSNRVAAIKRELDATESDYDREKLNERIAKLAGGVAVIKVGAATETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLQLAEDLNALAAQL-DGDQRTGVEIVQRSLTAPVHQIATNAGHNGDVVIETMRQS--GQGFNALTGVYEDLMATGIVDATKVVRLAVQDAVSIASLLVTTEVVIADKPEPE 525          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_NOCSJ (60 kDa chaperonin 2 OS=Nocardioides sp. (strain BAA-499 / JS614) GN=groL2 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55
Identity = 123/239 (51.46%), Postives = 160/239 (66.95%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG +  + ++GL +E+T +E LG ARKV I KD TTI+  A   D+I  R+ Q++ E+ ++DS YD EKL ER+AKL+GGVAVIKVGAATE EL++RK RIEDA     AA+EEGIV GGG ALV  ++   A  DKL+   DE +GA IV+ A  AP   IA NA                  G NA T +Y +M+ +G+IDPAKVTR ALQNAAS+A + LTT+A+V +
Sbjct:  286 MLQDIAILTGGQVISEEVGLKLESTGIELLGQARKVVITKDETTIVEGAGDADQIAGRVNQIRAEIEKSDSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALVQAAN---AAFDKLDLTGDEAVGAQIVRFATDAPLKQIAINAGLEGGVVAEKVRGLTAGHGLNAATGEYVDMIASGIIDPAKVTRSALQNAASIAALFLTTEAVVAD 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_MYXXD (60 kDa chaperonin 2 OS=Myxococcus xanthus (strain DK 1622) GN=groL2 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55
Identity = 116/249 (46.59%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIA +TG    A DLG+ ++  +++ LG A+++T+ KD+TTI+  A  + EI+AR+ Q++ ++ ET S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA NAT AA+EEG+VPGGG A +     + A+        E+ G DI+++A+  P   I  N              S    G+NA T  YE++L AGVIDPAKV+R ALQNAASV+ ++LTT+A+V E   PK    LP
Sbjct:  287 MLEDIATLTGGRMIAEDLGIKLDTITLQDLGRAKRITVDKDNTTIVDGAGGQQEIEARVKQIRAQIEETSSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGVVPGGGVAYIRC---LKALDGLQLSGGEKFGVDIIRRAVEEPLRQIVGNGGLEGSVVVNKVKESSGPFGFNAATGTYEDLLAAGVIDPAKVSRTALQNAASVSSLMLTTEAMVAE--RPKEEKDLP 530          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_OCHA43.735e-5549.1760 kDa chaperonin OS=Ochrobactrum anthropi (strain... [more]
CH60_GEOUR3.735e-5546.0360 kDa chaperonin OS=Geobacter uraniireducens (str... [more]
CH601_ANADF3.735e-5548.9860 kDa chaperonin 1 OS=Anaeromyxobacter sp. (strai... [more]
CH60_SHEWM4.879e-5548.7460 kDa chaperonin OS=Shewanella woodyi (strain ATC... [more]
CH60_RICM54.879e-5546.8060 kDa chaperonin OS=Rickettsia massiliae (strain ... [more]
CH60_PSYWF4.879e-5546.2260 kDa chaperonin OS=Psychrobacter sp. (strain PRw... [more]
CH60_ALCBS4.879e-5547.0660 kDa chaperonin OS=Alcanivorax borkumensis (stra... [more]
CH602_SYNS94.879e-5547.5260 kDa chaperonin 2 OS=Synechococcus sp. (strain C... [more]
CH602_NOCSJ4.879e-5551.4660 kDa chaperonin 2 OS=Nocardioides sp. (strain BA... [more]
CH602_MYXXD4.879e-5546.5960 kDa chaperonin 2 OS=Myxococcus xanthus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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