EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_MYCSK (60 kDa chaperonin 1 OS=Mycobacterium sp. (strain KMS) GN=groL1 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.322e-55
Identity = 119/238 (50.00%), Postives = 156/238 (65.55%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQD+AI+TG +  + ++GL +E   +  LG ARKV I KD TTI+  A   + IQ R+AQ++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+  +   P++++     DE  GA+IV+ AL AP   IA N              S   TG NA T +YE++L AGV DP KVTR ALQNAAS+A + LTT+A+V +
Sbjct:  286 MLQDMAILTGGQVISEEVGLSLETADISLLGQARKVVITKDETTIVEGAGDAEAIQGRVAQIRAEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQAA---PSLEELNLTGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSAAGTGLNAATGEYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAVVAD 520          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_MYCSJ (60 kDa chaperonin 1 OS=Mycobacterium sp. (strain JLS) GN=groL1 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.322e-55
Identity = 119/238 (50.00%), Postives = 156/238 (65.55%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQD+AI+TG +  + ++GL +E   +  LG ARKV I KD TTI+  A   + IQ R+AQ++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+  +   P++++     DE  GA+IV+ AL AP   IA N              S   TG NA T +YE++L AGV DP KVTR ALQNAAS+A + LTT+A+V +
Sbjct:  286 MLQDMAILTGGQVISEEVGLSLETADISLLGQARKVVITKDETTIVEGAGDAEAIQGRVAQIRAEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQAA---PSLEELNLTGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSAAGTGLNAATGEYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAVVAD 520          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_STRMU (60 kDa chaperonin OS=Streptococcus mutans GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 117/243 (48.15%), Postives = 164/243 (67.49%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIA++TG      DLGL +++T+++ LG A +VT+ KDST I+  +  K+ +  R+  +K ++    S +D EKL ER+AKLSGGVAVIKVGAATETEL++ KLRIEDA NAT AA+EEGIV GGG AL+++ + V A+ D  +DA    G ++V +AL  P   IA NA             S   TG+NA   ++ +M+ AG+IDP KVTR ALQNAASVA ++LTT+A+V +  +P+
Sbjct:  286 MLEDIAVLTGGTVITEDLGLELKDTTIDALGQAARVTVDKDSTVIVEGSGGKEAVANRVNLIKSQIETATSDFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALINVIEKVAAL-DLTDDA--ATGRNLVLRALEEPVRQIAKNAGYEGSVIIDKLKNSSAGTGFNAANGEWVDMIDAGIIDPVKVTRSALQNAASVASLILTTEAVVADHPAPE 525          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_SHEDO (60 kDa chaperonin OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 112/238 (47.06%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQD+AI+TG    A ++GL +E  ++E LGTA++V I KD+TTII  +    +I +R+AQ+K+++ ++ S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV ++  +  I  ++ + D++ G  I  +A+ AP   IA NA                  GYNA  D Y +ML+ G++DP KVTR ALQ AAS+AG+++TT+A++ E
Sbjct:  288 MLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGSGEHTQITSRVAQIKQQMEDSSSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASMIADI--EVLNEDQKHGVVIALRAMEAPLRQIATNAGQEASVVANTVKNGTGNYGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMIAE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_RICAE (60 kDa chaperonin OS=Rickettsia africae (strain ESF-5) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 116/250 (46.40%), Postives = 165/250 (66.00%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +++DIAI+T  E    DLG+ +EN S++ LGTA++VTI K++T I+     K  I+ R+ Q+K ++AET S YD EKL ER+AKLSGGVAV+KVG ATE E+++RK R+EDA  AT AA+EEG+V GGG  L+H S   P  K K+E+ D++ G +IV +AL  P   I  NA               +   G+NA   +Y +M++AG+IDPAKV R ALQ+A SVA +++TT+ ++V+  S K   P+P
Sbjct:  288 MMEDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQ--PLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDATSVASLIITTETLIVDEPSDKAE-PMP 534          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PSEU5 (60 kDa chaperonin OS=Pseudomonas stutzeri (strain A1501) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 108/238 (45.38%), Postives = 165/238 (69.33%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG    + ++GL +E  ++E LG A++V + K++TTII  A ++ +I+AR+AQ++K++ +T S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R+EDA +AT AA+EEG+VPGGG ALV     +  +K   ++ D+ +G  ++++A+ AP   I  NA                  G+NA +D Y +M++ G++DPAKVTR ALQ AAS+ G+++TT+A+V E
Sbjct:  288 MLQDIAILTGGTVISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGAQADIEARVAQIRKQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAISELKG--DNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDKVKQGSGNYGFNAASDTYGDMIEMGILDPAKVTRSALQAAASIGGLMVTTEAMVAE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PORYE (60 kDa chaperonin, chloroplastic OS=Porphyra yezoensis GN=groL PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 118/238 (49.58%), Postives = 160/238 (67.23%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            LL+D++I+T  +    D GL ++   ++ LG AR+V + KDSTTIIAD   + ++++R  Q+K+++  +DS+Y+ EKL ER+AKLSGGVAVIKVGAATETE++D+KLR+ DA NAT AAIEEGIVPGGGA  VH+S  +          DE +GA IV++A+  P   IA NA            + ++  GY+A      NM   G+IDPAKV R ALQNAAS+A MVLTT+ IVV+
Sbjct:  288 LLEDMSILTNGQVITEDAGLSLDTVQLDMLGKARRVIVTKDSTTIIADG-HEIKVKSRCEQIKRQIETSDSLYEREKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLGDAINATKAAIEEGIVPGGGATNVHISSELFTWAKNNLVEDELIGALIVERAVTYPLRRIAFNAGDNGAVIVEKVKSHDFHIGYDAANGNIVNMYDRGIIDPAKVARSALQNAASIAAMVLTTECIVVD 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PORGI (60 kDa chaperonin OS=Porphyromonas gingivalis GN=groL PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 114/240 (47.50%), Postives = 160/240 (66.67%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQ 735
            +L+DIAI+TG    + + GL +EN +++ LGTA KVT+ KD+TTI+  A +K+ I +RI Q+K ++  T S YD EKL ER+AKL+GGVAV+ VGAA+E E++++K R+EDA +AT AAIEEG VPGGG A +     +  +K   E+ DE  G +IV++A+  P   I  NA              +   GYNA TD +EN+   GVIDPAKVTR AL+NAAS+AGM LTT+ ++ + +
Sbjct:  288 MLEDIAILTGGTVISEETGLKLENATMDMLGTAEKVTVDKDNTTIVNGAGNKEGIASRITQIKAQIENTTSDYDREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVEDALSATRAAIEEGTVPGGGTAYIRAIAALEGLKG--ENEDETTGIEIVKRAIEEPLRQIVANAGKEGAVVVQKVKEGKDDFGYNARTDVFENLYTTGVIDPAKVTRVALENAASIAGMFLTTECVIADKK 525          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_METPB (60 kDa chaperonin OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 119/251 (47.41%), Postives = 168/251 (66.93%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA--XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+T  +  + DLG+ +EN ++  LG A++V I K++TTII     K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIVPGGG AL+     V  +K  + D   + G  IV KAL AP   IA NA                  T G+NA T++Y +M+Q+G++DPAKV R ALQ+AASVAG+++TT+A+V +  +PK   P P
Sbjct:  288 MLEDIAILTKGQTISEDLGIKLENVALPMLGRAKRVRIEKENTTIIDGLGEKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALLRAKKAVAELKSDVPDV--QAGIKIVLKALEAPIRQIAQNAGVEGSIVVGKITDNTGSETYGFNAQTEEYVDMIQSGIVDPAKVVRTALQDAASVAGLLVTTEAMVAD--APKKDSPAP 534          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH605_RHIME (60 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 114/250 (45.60%), Postives = 173/250 (69.20%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG    + DLG+ +E+ +++ LG A+KV+I K++TTII  A SK +I+ R AQ++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+     +  +  K  + D+R+G D+V++A+ AP   IA NA              +E++ G+NA T++Y ++   GVIDPAKV R ALQ+AASVAG+++TT+A++ E    +    LP
Sbjct:  288 MLEDIAILTGGTVVSEDLGIKLESVTLDMLGRAKKVSIEKENTTIIDGAGSKADIEGRTAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDGL--KTANNDQRVGVDLVRRAIEAPVRQIAENAGAEGSIIVGKLREKTEFSYGWNAQTNEYGDLYAMGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPALP 535          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_MYCSK8.322e-5550.0060 kDa chaperonin 1 OS=Mycobacterium sp. (strain K... [more]
CH601_MYCSJ8.322e-5550.0060 kDa chaperonin 1 OS=Mycobacterium sp. (strain J... [more]
CH60_STRMU1.087e-5448.1560 kDa chaperonin OS=Streptococcus mutans GN=groL ... [more]
CH60_SHEDO1.087e-5447.0660 kDa chaperonin OS=Shewanella denitrificans (str... [more]
CH60_RICAE1.087e-5446.4060 kDa chaperonin OS=Rickettsia africae (strain ES... [more]
CH60_PSEU51.087e-5445.3860 kDa chaperonin OS=Pseudomonas stutzeri (strain ... [more]
CH60_PORYE1.087e-5449.5860 kDa chaperonin, chloroplastic OS=Porphyra yezoe... [more]
CH60_PORGI1.087e-5447.5060 kDa chaperonin OS=Porphyromonas gingivalis GN=g... [more]
CH60_METPB1.087e-5447.4160 kDa chaperonin OS=Methylobacterium populi (stra... [more]
CH605_RHIME1.087e-5445.6060 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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