EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_VIBVY (60 kDa chaperonin 2 OS=Vibrio vulnificus (strain YJ016) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 110/238 (46.22%), Postives = 165/238 (69.33%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIA++T     + ++GL +E  ++EQLG+A+KVTI KD+TTI+  AA +  I+ R+A ++K++  T S YD EKL +RIAKLSGGVAVIK+GAATE E++++K R++DA +AT AA+EEGIV GGG AL  ++  +  +K   ++ D+ +G  +  +A+  P   IA NA            A +   GYNA T +Y NM++ G++DPAKVTR ALQ AASVAG+++TT+A++ +
Sbjct:  288 MLEDIAVLTAGTVISEEIGLELEKATIEQLGSAKKVTITKDTTTIVGGAAQESAIRDRVATIEKQIENTTSSYDKEKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALTKIASELADLKG--DNDDQNVGIRVALRAMEEPLRQIAINAGDEGSVVANAVKAGDAHYGYNAATGEYGNMIEMGILDPAKVTRSALQYAASVAGLMITTEAMITD 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_VIBVU (60 kDa chaperonin 2 OS=Vibrio vulnificus GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 110/238 (46.22%), Postives = 165/238 (69.33%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIA++T     + ++GL +E  ++EQLG+A+KVTI KD+TTI+  AA +  I+ R+A ++K++  T S YD EKL +RIAKLSGGVAVIK+GAATE E++++K R++DA +AT AA+EEGIV GGG AL  ++  +  +K   ++ D+ +G  +  +A+  P   IA NA            A +   GYNA T +Y NM++ G++DPAKVTR ALQ AASVAG+++TT+A++ +
Sbjct:  288 MLEDIAVLTAGTVISEEIGLELEKATIEQLGSAKKVTITKDTTTIVGGAAQESAIRDRVATIEKQIENTTSSYDKEKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALTKIASELADLKG--DNDDQNVGIRVALRAMEEPLRQIAINAGDEGSVVANAVKAGDAHYGYNAATGEYGNMIEMGILDPAKVTRSALQYAASVAGLMITTEAMITD 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_CHRVO (60 kDa chaperonin 2 OS=Chromobacterium violaceum GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 113/243 (46.50%), Postives = 163/243 (67.08%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L DIA++TG E  A ++GL +E  +++QLG A++V + K++TTII  A     IQAR+ +++K++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+     +  +  K ++A++  G  IV +A+ AP   I  NA              +   GYNA + +Y +ML+ GV+DPAKVTR ALQ+AASVAG++LTT  ++ E    K
Sbjct:  288 MLTDIAVLTGGEVIAEEVGLTLEKATLDQLGQAKRVEVGKENTTIIDGAGEAATIQARVGEIRKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALLRARATLENL--KTDNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGNFGYNAASGEYGDMLEMGVLDPAKVTRSALQHAASVAGLMLTTDCMIAELPEDK 528          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_BURP0 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1106a) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 112/239 (46.86%), Postives = 162/239 (67.78%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVES 732
            LL+DIAI+TG +    + GL +E  ++++LG A++V + K++TT+I  A  K  I AR+ Q++ ++AE  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   + A+     +AD++ G  IV +AL  P   I  NA            A +   GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A V E+
Sbjct:  288 LLEDIAILTGGQVITEETGLTLEKATLQELGRAKRVEVGKENTTLIDGAGDKPNIDARVKQIRAQIAEATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAG--ANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEA 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 116/239 (48.54%), Postives = 165/239 (69.04%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHN-AXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG    A +LGL +E  +++ LG A++VT+ KD+TTI+  A  K++I+AR+  ++ ++ ET S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA +AT AA+EEGIVPGGG A +     V A++    +  E++G DIV++A+  P   I+ N              A E   G+NA T +YE++++AGVIDP KV+R ALQNAASVA ++LTT A+V E
Sbjct:  288 MLEDIAILTGGRMIAEELGLKLEQVTLKDLGRAKRVTVDKDNTTIVDGAGKKEDIEARVKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRC---VKALEGVKVNEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_THEFY (60 kDa chaperonin 1 OS=Thermobifida fusca (strain YX) GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 119/239 (49.79%), Postives = 158/239 (66.11%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG +    ++GL +ENT ++ LG ARKV + KD TTI+  A     I  R+ +++ E+  TDS YD EKL ER+A+L+GGVAVIK GAATE EL++RK RIEDA     AA+EEGI+PGGG AL+  S    A  +KLE + DE +GA IV++A+  P   IA NA            + E   G NA T +Y ++ + GVIDP KVTR ALQNAAS+AG+ LTT+A++ E
Sbjct:  287 MLQDIAILTGGQVITEEVGLKLENTELDMLGRARKVVVTKDETTIVDGAGDASAIAGRVNEIRAEIERTDSDYDREKLQERLARLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGILPGGGVALLQAS---IAAFEKLELEGDEAIGASIVRRAVEEPLKQIAINAGYEGGVVVEKVKSLEPGIGLNAATGEYTDLFKDGVIDPTKVTRSALQNAASIAGLFLTTEAVIAE 522          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_SYNAS (60 kDa chaperonin 1 OS=Syntrophus aciditrophicus (strain SB) GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 114/243 (46.91%), Postives = 167/243 (68.72%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG +  + +LG+ +++ ++  LGT +++ I KD+TTI+  A S+ +I+ R+ Q++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     +PA+       DER G +IV++A+  P   IA NA             +    G+NA T+KY +M++AG+IDP KV R ALQNAASVA ++LTT+A++ E+   K
Sbjct:  288 MLEDIAILTGGKVVSEELGIKLDSITLTDLGTCKRLHITKDNTTIVDGAGSQADIEGRVKQIRTQIEETTSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRT---LPALAGMDLPDDERPGLNIVKRAVEEPMRQIAANAGFEGSIVVEKVKENTGNFGFNADTEKYVDMMEAGIIDPTKVVRFALQNAASVASLLLTTEAMIAEAPKKK 527          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_RHOPA (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54
Identity = 115/239 (48.12%), Postives = 167/239 (69.87%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG +  + DLG+ +E  +++ LG A+KV I K++TTI+  A  K EI+AR++Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+     V  I +  ++ D + G +IV KAL AP   IA NA             ++  T G++A T++Y +ML  G++DPAKV R ALQ+A+SVA +++TT+A+V E
Sbjct:  288 MLEDIAILTGGQLISEDLGIKLETVTLKMLGRAKKVVIDKENTTIVNGAGKKPEIEARVSQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRISN--DNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKTETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDASSVASLLVTTEAMVAE 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_THEBR (60 kDa chaperonin OS=Thermoanaerobacter brockii GN=groL PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 118/239 (49.37%), Postives = 165/239 (69.04%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG +  + +LG  +++  ++ LG AR+V + K+ TTI+  A    EI+ R+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+ GAATETEL+++K RIEDA  AT AA+EEGIVPGGG AL+++ + V  + D LE  D + GA IV +AL  P   IA NA            A+ +   GY+A  +++ +M +AG++DP KVTR ALQNAAS+A M+LTT+AIVV+
Sbjct:  286 MLQDIAILTGGQVISEELGYDLKDVRLDMLGRARQVKVTKEYTTIVGGAGDPSEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLE-GDFKTGAKIVLRALEEPVRQIATNAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAIVVD 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_SHESH (60 kDa chaperonin OS=Shewanella sediminis (strain HAW-EB3) GN=groL PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 115/238 (48.32%), Postives = 162/238 (68.07%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG    A ++GL +E  ++E LGTA++V I KD TTII     +D+I+AR+AQ+K +  E+ S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++  +  +  ++ + D++ G  I  +A+ AP   IA NA                  GYNA  D Y +ML+ G++DP KVTR ALQ AAS+AG+++TT+A+V E
Sbjct:  288 MLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGTGEQDQIKARVAQIKIQAEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIAEV--EVINEDQKHGVVIALRAMEAPLRQIAANAGEEGSVVANNVKNGSGNYGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVGE 523          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_VIBVY1.087e-5446.2260 kDa chaperonin 2 OS=Vibrio vulnificus (strain Y... [more]
CH602_VIBVU1.087e-5446.2260 kDa chaperonin 2 OS=Vibrio vulnificus GN=groL2 ... [more]
CH602_CHRVO1.087e-5446.5060 kDa chaperonin 2 OS=Chromobacterium violaceum G... [more]
CH602_BURP01.087e-5446.8660 kDa chaperonin 2 OS=Burkholderia pseudomallei (... [more]
CH602_ANADE1.087e-5448.5460 kDa chaperonin 2 OS=Anaeromyxobacter dehalogena... [more]
CH601_THEFY1.087e-5449.7960 kDa chaperonin 1 OS=Thermobifida fusca (strain ... [more]
CH601_SYNAS1.087e-5446.9160 kDa chaperonin 1 OS=Syntrophus aciditrophicus (... [more]
CH601_RHOPA1.087e-5448.1260 kDa chaperonin 1 OS=Rhodopseudomonas palustris ... [more]
CH60_THEBR1.419e-5449.3760 kDa chaperonin OS=Thermoanaerobacter brockii GN... [more]
CH60_SHESH1.419e-5448.3260 kDa chaperonin OS=Shewanella sediminis (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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