EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PSEPG (60 kDa chaperonin OS=Pseudomonas putida (strain GB-1) GN=groL PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 111/242 (45.87%), Postives = 167/242 (69.01%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQS 738
            +LQDIA++TG +  + ++GL +E  ++E LG A++V + K++TTII  A +  EI+AR+ Q++ ++ ET S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R+EDA +AT AA+EEG+VPGGG ALV     + AI D K E+ D+ +G  ++++A+ AP   I  NA                  GYNA T +Y +M++ G++DPAKVTR ALQ AAS+ G+++TT+A++ ++ S
Sbjct:  288 MLQDIAVLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRA---LAAIVDLKGENEDQNVGIALLRRAVEAPLRQITANAGDEPSVVADKVKQGSGNFGYNAATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMIADAPS 526          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CLOK5 (60 kDa chaperonin OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=groL PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 120/239 (50.21%), Postives = 157/239 (65.69%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+T  +  + +LG  ++  S+E LG A  V I K++TTI+     K  IQ R++Q+K ++ ET S +D EKL ER+AKLSGGVAVIKVGAATETEL+++K+RIEDA  AT A +EEG+ PGGG A V+    +P +     D AD ++G DI+ KAL  P   IA NA             SE   GY+ +TDKY NM+  G++DP KVTR ALQNAASVA   LTT+A VV+
Sbjct:  286 MLQDIAILTDGKVISEELGRDLKEVSLEDLGRAESVKIDKENTTIVNGRGDKKSIQDRVSQIKAQIEETTSEFDKEKLQERLAKLSGGVAVIKVGAATETELKEKKMRIEDALAATKAGVEEGMGPGGGTAYVNA---IPEVSKLTSDVADVKVGIDIITKALEEPVRQIAANAGVEGSVIIEKVKNSEPGVGYDVLTDKYVNMIDNGIVDPTKVTRSALQNAASVAATFLTTEAAVVD 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CLOK1 (60 kDa chaperonin OS=Clostridium kluyveri (strain NBRC 12016) GN=groL PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 120/239 (50.21%), Postives = 157/239 (65.69%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+T  +  + +LG  ++  S+E LG A  V I K++TTI+     K  IQ R++Q+K ++ ET S +D EKL ER+AKLSGGVAVIKVGAATETEL+++K+RIEDA  AT A +EEG+ PGGG A V+    +P +     D AD ++G DI+ KAL  P   IA NA             SE   GY+ +TDKY NM+  G++DP KVTR ALQNAASVA   LTT+A VV+
Sbjct:  286 MLQDIAILTDGKVISEELGRDLKEVSLEDLGRAESVKIDKENTTIVNGRGDKKSIQDRVSQIKAQIEETTSEFDKEKLQERLAKLSGGVAVIKVGAATETELKEKKMRIEDALAATKAGVEEGMGPGGGTAYVNA---IPEVSKLTSDVADVKVGIDIITKALEEPVRQIAANAGVEGSVIIEKVKNSEPGVGYDVLTDKYVNMIDNGIVDPTKVTRSALQNAASVAATFLTTEAAVVD 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CAMLR (60 kDa chaperonin OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=groL PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 123/244 (50.41%), Postives = 161/244 (65.98%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG E  + +LG  +E+ S++ LG A  V I KD+TTI+  A  K  I ARI Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+     +          DE +GA IV++AL AP   IA NA             S E  TG++A   +Y NML++G+IDP KV R AL NA SVA M+LTT+A + E +  K
Sbjct:  287 MLEDIAILTGGEVISEELGRTLESASIQDLGQASSVIIDKDNTTIVNGAGEKANINARINQIKAQIAETSSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKSKISLNL----QGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNTVENSKEENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDK 526          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BURTH (60 kDa chaperonin OS=Burkholderia thailandensis GN=groL PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 117/249 (46.99%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + A+     +AD+  G  IV +A+  P   I  N             A +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E   PK   P+P
Sbjct:  288 MLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAALTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAE--LPKEDAPMP 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH603_BURCM (60 kDa chaperonin 3 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL3 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 112/239 (46.86%), Postives = 163/239 (68.20%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVES 732
            +L+DIAI+TGA   + + G  ++  S+E LG+A++V +RK+ T II  A  ++ I+AR+  ++ ++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R++DA +AT AA+EEGIVPGGG AL+       ++K    ++D+  G  IV +AL AP  +IA NA              +   GYNA T +Y ++++AGV+DP KVTR ALQNAAS+AG++LTT A V ++
Sbjct:  288 MLEDIAILTGATVISEETGKQLQKASLEDLGSAKRVEVRKEDTIIIDGAGDQERIEARVKSIRTQIDETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSTATSLKG--ANSDQDAGIQIVLRALEAPLRVIASNAGDEPSVVIAKVLEGKGNFGYNAATGEYGDLVEAGVVDPTKVTRTALQNAASIAGLILTTDATVADA 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_BURPS (60 kDa chaperonin 2 OS=Burkholderia pseudomallei GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 111/239 (46.44%), Postives = 162/239 (67.78%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVES 732
            LL+DIAI+TG +    + GL +E  ++++LG A+++ + K++TT+I  A  K  I AR+ Q++ ++AE  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   + A+     +AD++ G  IV +AL  P   I  NA            A +   GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A V E+
Sbjct:  288 LLEDIAILTGGQVITEETGLTLEKATLQELGRAKRIEVGKENTTLIDGAGDKPNIDARVKQIRAQIAEATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAG--ANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEA 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_BURP6 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 668) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 111/239 (46.44%), Postives = 162/239 (67.78%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVES 732
            LL+DIAI+TG +    + GL +E  ++++LG A+++ + K++TT+I  A  K  I AR+ Q++ ++AE  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   + A+     +AD++ G  IV +AL  P   I  NA            A +   GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A V E+
Sbjct:  288 LLEDIAILTGGQVITEETGLTLEKATLQELGRAKRIEVGKENTTLIDGAGDKPNIDARVKQIRAQIAEATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAG--ANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEA 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_BURP1 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1710b) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 111/239 (46.44%), Postives = 162/239 (67.78%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVES 732
            LL+DIAI+TG +    + GL +E  ++++LG A+++ + K++TT+I  A  K  I AR+ Q++ ++AE  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   + A+     +AD++ G  IV +AL  P   I  NA            A +   GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A V E+
Sbjct:  288 LLEDIAILTGGQVITEETGLTLEKATLQELGRAKRIEVGKENTTLIDGAGDKPNIDARVKQIRAQIAEATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAG--ANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEA 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_BURTA (60 kDa chaperonin 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 117/249 (46.99%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + A+     +AD+  G  IV +A+  P   I  N             A +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E   PK   P+P
Sbjct:  288 MLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAALTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAE--LPKEDAPMP 532          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_PSEPG1.419e-5445.8760 kDa chaperonin OS=Pseudomonas putida (strain GB... [more]
CH60_CLOK51.419e-5450.2160 kDa chaperonin OS=Clostridium kluyveri (strain ... [more]
CH60_CLOK11.419e-5450.2160 kDa chaperonin OS=Clostridium kluyveri (strain ... [more]
CH60_CAMLR1.419e-5450.4160 kDa chaperonin OS=Campylobacter lari (strain RM... [more]
CH60_BURTH1.419e-5446.9960 kDa chaperonin OS=Burkholderia thailandensis GN... [more]
CH603_BURCM1.419e-5446.8660 kDa chaperonin 3 OS=Burkholderia ambifaria (str... [more]
CH602_BURPS1.419e-5446.4460 kDa chaperonin 2 OS=Burkholderia pseudomallei G... [more]
CH602_BURP61.419e-5446.4460 kDa chaperonin 2 OS=Burkholderia pseudomallei (... [more]
CH602_BURP11.419e-5446.4460 kDa chaperonin 2 OS=Burkholderia pseudomallei (... [more]
CH601_BURTA1.419e-5446.9960 kDa chaperonin 1 OS=Burkholderia thailandensis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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