EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_BRASO (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ORS278) GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.419e-54
Identity = 111/239 (46.44%), Postives = 168/239 (70.29%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG    + DLG+ +EN ++  LG A+KV I K++TTI+  A +K +I+AR  Q++ ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+  +  +  +  K  +AD++ G DI+++A+  P   I  NA              + ++ G+NA T +Y++++QAGVIDPAKV R ALQ+AASVA +++TT+A+V +
Sbjct:  288 MLEDIAILTGGTTISEDLGIKLENVTLSMLGRAKKVVIDKENTTIVDGAGAKKDIEARTQQIRLQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGVALLRATKVLDGV--KTANADQKAGVDIIRRAIQVPVRQIVQNAGDDGSLVVGKLLEKDSYSWGFNAATGEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTEALVAD 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PARD8 (60 kDa chaperonin OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 111/240 (46.25%), Postives = 160/240 (66.67%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQ 735
            +L+DIA++TG    + + GL +E  +++ LGTA K+T+ KD+TTI+  A  K+ IQARI Q+K ++  T S YD EKL ER+AK++GGVAV+ VGA +E E++++K R++DA +AT AAIEEG VPGGG A +   D +  +K   ++ DE  G +IV++A+  P   I  NA              +   GYNA  D +EN+ +AGVIDPAKVTR AL+NAAS+AGM LTT+ ++ E +
Sbjct:  288 MLEDIAVLTGGTVISEEKGLKLEGATMDMLGTAEKITVDKDTTTIVNGAGDKEAIQARIGQIKIQMENTTSDYDKEKLQERLAKMAGGVAVLYVGAPSEVEMKEKKDRVDDALHATRAAIEEGTVPGGGVAYIRAIDALEGMKG--DNEDETTGIEIVKRAIEEPLRQIVANAGKEGAVIVQKVKEGKGDFGYNARKDCFENLCEAGVIDPAKVTRVALENAASIAGMFLTTECVIAEKK 525          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_FUSNP (60 kDa chaperonin OS=Fusobacterium nucleatum subsp. polymorphum GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 112/240 (46.67%), Postives = 159/240 (66.25%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQ 735
            +L+DIAI+TG E  + + G+ +E  +++QLG A+ V + KD T I+     + +I AR+  +K ++ ET S YD EKL ER+AKLSGGVAVIKVGAATE E++D+KLRIEDA NAT AA+EEGIV GGG  L+   D + ++KD  E  +  +G +IV++AL AP   IA N              S    G++A  +KY NM++ G+IDPAKVTR A+QN+ SVA ++LTT+ ++   +
Sbjct:  286 ILEDIAILTGGEVISEEKGMKLEEATIQQLGKAKTVKVTKDLTVIVDGGGEQKDISARVNSIKAQIEETTSDYDKEKLQERLAKLSGGVAVIKVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTILL---DIIESMKDFNETGEIAMGIEIVKRALEAPIKQIAENCGLNGGVVLEKVRMSPKGFGFDAKNEKYVNMIECGIIDPAKVTRAAIQNSTSVASLLLTTEVVIANKK 522          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CLONN (60 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 115/238 (48.32%), Postives = 162/238 (68.07%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG E  + ++G  +++ +++ LGTA  V I K++TTI+    +K+ I  R+ Q+++++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA  AT AA+EEGIV GGG A +     V  + D  ++A+ RLG  I+++AL  P   IA NA             SE   G++A+  +Y NM+Q G++DPAKVTR ALQNAASVA   LTT+ +V E
Sbjct:  286 MLRDIAILTGGEVISEEVGRELKDVTLDMLGTAESVKISKENTTIVNGKGNKEVIADRVGQIRRQIEETSSEFDKEKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALAATKAAVEEGIVAGGGTAYLRAIKEVEKLTD--DNAEVRLGIAIIRRALEEPVRQIAANAGLEGSVIIDKIKNSEDGIGFDALEGEYTNMMQKGIVDPAKVTRSALQNAASVASTFLTTECVVAE 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CLOBO (60 kDa chaperonin OS=Clostridium botulinum GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 115/238 (48.32%), Postives = 161/238 (67.65%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG E  + +LG  I++ +++ LGTA  + + K++TTI+    SK EI+ RI Q+K+++ ET S +D EKL ER+AK++GGVAV+KVGAATETEL++RKLRIEDA  AT AA+EEGIV GGG A +     V  + D   +++ RLG  I+++AL  P   IA NA              +   G++A+  +Y NM+Q G++DPAKVTR ALQNAASVA   LTT+ +V E
Sbjct:  286 MLRDIAILTGGEVISEELGREIKDVTLDMLGTAESIKVTKENTTIVNGKGSKAEIEDRIGQIKRQIEETTSEFDKEKLQERLAKIAGGVAVVKVGAATETELKERKLRIEDALAATKAAVEEGIVAGGGTAYLRAIKEVEKLTD--NNSEIRLGIAIIRRALEEPVRQIASNAGLEGSVIIDKIMNGQEGMGFDALEGEYVNMVQKGIVDPAKVTRSALQNAASVASTFLTTECVVAE 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CLOBB (60 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 117/249 (46.99%), Postives = 162/249 (65.06%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG    A +LG  ++  +++ LG A  V + KD+T ++    + + I+ RI+Q+K ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA  AT AA+EEGIVPGGG A +++   V  +   ++D +  LG  I+ K+L  P   IA NA             SE  TGY+A+  KY NM+++G++DP KVTR ALQNAASV+   LTT+A V E    +   P P
Sbjct:  286 MLEDIAILTGGTVIAEELGRDLKEVTLDMLGQAESVKVSKDNTVVVNGKGNPENIKDRISQIKAQIEETSSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIVPGGGTAYINVIKEVEKLTSDVQDTE--LGIKIIVKSLEEPLRQIASNAGVEGSVIIEKVKNSEVGTGYDALYGKYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEAAVAEIPQKEPAMPAP 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 115/248 (46.37%), Postives = 165/248 (66.53%), Query Frame = 1
Query:   19 LQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA------XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            L DIA++TG +    DLG+ +E+ +++ LG A KV + K+ TTII      ++I+ARI Q+K+++ ET S YD EKL ER+AKLSGGVA+I+VGAATE EL+++K R+EDA +AT AA+EEGIVPGGG ALV  S+ +  +K   ++ D++LG DI++KA+  P   IA+NA                     W  G+NA T +Y +M +AG+IDP KV R A++NAASVAG +LT +A++ +    K
Sbjct:  289 LGDIAVLTGGQAITEDLGIKLESVTLDMLGQAEKVVVDKEHTTIIGGKGDPEQIKARIEQIKRQIQETTSDYDREKLQERLAKLSGGVAIIRVGAATEAELKEKKYRVEDAVHATKAAVEEGIVPGGGVALVRASEALEDLKG--DNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSW--GFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAEALIADLPEEK 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 113/239 (47.28%), Postives = 168/239 (70.29%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+T     + DLG+ +EN ++  LG A+K+T+ K++TTII    SK+EI  RIAQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+     +  I  K  + D+R+G +IV++AL APA  IA NA              S+++ G+NA T ++ ++   GVIDPAKV R ALQ+A+S+AG+++TT+A++ E
Sbjct:  288 MLEDIAILTAGTVISEDLGIKLENVTLNMLGRAKKITVEKENTTIIDGVGSKEEISGRIAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDNI--KTANDDQRVGVEIVRRALEAPARQIAENAGAEGSVVVGKLREKSDFSYGWNAQTGEFGDLYAQGVIDPAKVVRTALQDASSIAGLLVTTEAMIAE 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH603_RHIL3 (60 kDa chaperonin 3 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL3 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 116/252 (46.03%), Postives = 176/252 (69.84%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA--DERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+T     + DLG+ +E+ +++ LG A+KV+I K++TTI+  + +K +I+ R+AQ++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+     V A+ D +E A  D+R+G DIV++A+ APA  IA NA              SE++ G+NA T +Y ++   GVIDPAKV R ALQ+AAS+AG+++TT+A++ E        P+P
Sbjct:  288 MLEDIAILTAGTVISEDLGIKLESVTLDMLGRAKKVSIEKENTTIVDGSGAKSDIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRA---VKAL-DNVETANGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMIAEKPRKDAPPPMP 535          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_SYNSC (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9605) GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 112/241 (46.47%), Postives = 165/241 (68.46%), Query Frame = 1
Query:   19 LQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSP 741
            L DIAI+TG    + D  + ++  ++E LG AR+VTI K++TTI+A+   +  +  R++ +++EL  T+S YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AA+EEGIV GGG+ L+ L+D + A+   L + D+R G +IVQ+AL AP   IA NA            +S    G+NA++  YE+++ AG++D AKV R A+Q++ S+A +++TT+ ++ +   P
Sbjct:  287 LADIAILTGGTLISEDKAMTLDKVTLEDLGKARRVTISKENTTIVANDDHRQAVSERVSAIRRELEATESDYDREKLQERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLQLADSLDALASSL-NGDQRTGVEIVQRALTAPIHQIATNAGQNGDVVIAGMRSS--GQGFNALSGVYEDLMAAGIVDAAKVVRLAVQDSISIASLLITTEVVIADKPEP 524          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_BRASO1.419e-5446.4460 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ... [more]
CH60_PARD81.854e-5446.2560 kDa chaperonin OS=Parabacteroides distasonis (s... [more]
CH60_FUSNP1.854e-5446.6760 kDa chaperonin OS=Fusobacterium nucleatum subsp... [more]
CH60_CLONN1.854e-5448.3260 kDa chaperonin OS=Clostridium novyi (strain NT)... [more]
CH60_CLOBO1.854e-5448.3260 kDa chaperonin OS=Clostridium botulinum GN=groL... [more]
CH60_CLOBB1.854e-5446.9960 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_AQUAE1.854e-5446.3760 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3... [more]
CH604_RHIEC1.854e-5447.2860 kDa chaperonin 4 OS=Rhizobium etli (strain CFN ... [more]
CH603_RHIL31.854e-5446.0360 kDa chaperonin 3 OS=Rhizobium leguminosarum bv.... [more]
CH601_SYNSC1.854e-5446.4760 kDa chaperonin 1 OS=Synechococcus sp. (strain C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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