EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 112/244 (45.90%), Postives = 167/244 (68.44%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG +  + DLG+ +E  ++  LG A+KV I K++TTI+  A + D+I+ R  Q++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E+++RK R++DA +AT AA+EEGIVPGGG AL   S  +  +     + D+R+GA+I++KAL AP   IAHNA             S ++  G++A    Y++++ AG+IDP KV R ALQ+A+SVAG+++TT+A+V E    K
Sbjct:  288 MLEDIAILTGGQVISEDLGIKLETVTLAMLGRAKKVRIEKENTTIVEGAGASDDIKGRCGQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASTALGNL--HFHNDDQRVGAEIIRKALQAPLRQIAHNAGEDGAVIAGKVLESNDYNYGFDAQIGDYKDLVAAGIIDPTKVVRTALQDASSVAGLLITTEAMVAEKPEKK 529          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_CORJK (60 kDa chaperonin 1 OS=Corynebacterium jeikeium (strain K411) GN=groL1 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54
Identity = 120/243 (49.38%), Postives = 156/243 (64.20%), Query Frame = 1
Query:   19 LQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            LQDIAI+TG +  A ++GL +E   +  LGTARKV + KD TTI+  A S +++  RI Q+++E+   DS YD+EKL ER+AKLSGGVAV++VGAATE EL++RK RIEDA     AA EEGIV GGGAAL+  +     + D L  + DE  G  IV+ AL AP   IAHNA                  G NA T +Y ++L AG+ DP KVTR ALQNAAS+A + LTT+A+V +   P+
Sbjct:  292 LQDIAILTGGQVIAEEVGLSLETADLPMLGTARKVVVTKDDTTIVDGAGSAEQLAGRIKQIRQEIENADSDYDAEKLQERLAKLSGGVAVLQVGAATEVELKERKHRIEDAVRNAKAAAEEGIVAGGGAALLQTAS---VLDDNLGLEGDEATGVQIVRAALAAPLKQIAHNAGLEPGVVVDKVANLPVGEGLNAATGEYVDLLGAGISDPVKVTRSALQNAASIAALFLTTEAVVADKPEPE 531          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_RICCK (60 kDa chaperonin OS=Rickettsia canadensis (strain McKiel) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 116/250 (46.40%), Postives = 166/250 (66.40%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +++DIAI+T  E    DLG+ +EN S++ LGTA++VTI K++T I+  +  K  I+ R+ Q+K ++AET S YD EKL ER+AKLSGGVAV+KVG ATE E+++RK R+EDA  AT AA+EEG+V GGG  L+H S  +   K K+E+ D++ G +IV +AL  P   I  NA               +   G+NA   +Y +M+QAG+IDPAKV R ALQ+AASVA +++TT+ ++V+   P    P+P
Sbjct:  288 MMEDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGSGDKKSIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHTSQIL--TKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNFGFNAQDMQYVDMIQAGIIDPAKVVRTALQDAASVASLIITTETLIVD--EPSKEEPMP 533          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PSEF5 (60 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 107/238 (44.96%), Postives = 165/238 (69.33%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIA++TG    + ++GL +E+T++E LG A++V + K++TTII  A  + +IQAR+ Q+++++A+T S YD EKL ER+AKLSGGVAVIKVGA +E E++++K R+EDA +AT AA+EEG+VPGGG AL+     +  +K   ++AD+ +G  ++++A+ AP   I  N+                  GYNA T +Y +M++ G++DP KVTR ALQ A+S+ G++LTT+A V E
Sbjct:  288 MLQDIAVLTGGTVISEEIGLSLESTTLEHLGNAKRVILSKENTTIIDGAGVEADIQARVTQIRQQVADTSSDYDREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRALQGINDLKG--DNADQDVGIAVLRRAIEAPLRQIVANSGDEPSVVVDKVKQGAGNFGYNAATSEYGDMIEMGILDPTKVTRSALQAASSIGGLILTTEAAVAE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_NOVAD (60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 117/244 (47.95%), Postives = 165/244 (67.62%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L DIA +T  E  + DLG+ +E+ ++  LG A+KVTI KD+TTI+  A S +EI+AR+ Q++ ++  T S YD EKL ER+AKL+GGVAVIKVG ATE E+++RK R++DA +AT AA+EEGIVPGGG AL++ +  +  +K    + D+  G DIV++A+ AP   IA NA              ++   G+NA TD YEN+  AGVIDP KV R ALQ+AASV+G+++TT+A + E    K
Sbjct:  288 MLGDIATLTAGEMISEDLGIKLESVTLAMLGQAKKVTIDKDNTTIVDGAGSAEEIKARVEQIRAQIEVTTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALEGLKG--ANDDQTKGIDIVRRAIQAPIRQIAANAGHDGAVVSGNLLRENDENQGFNAATDTYENLKAAGVIDPTKVVRTALQDAASVSGLLITTEAAISEKPDDK 529          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_METFK (60 kDa chaperonin OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 115/238 (48.32%), Postives = 159/238 (66.81%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG    A ++GL +E  ++E LG A++V I K++TTII  A S++ I+ RI Q+KK++ +  S YD EKL ER+AKL+GGVAVIKVGAATETE++++K R+EDA +AT AA+EEGIVPGGG AL+     +  +K   ++ D+  G  IV +A+  P   I  NA                  GYNA    Y ++++ GV+DPAKVTR ALQNAASVA ++LTT A+V E
Sbjct:  288 MLEDIAILTGGTVIAEEVGLSLEKVTLENLGQAKRVEIGKENTTIIDGAGSENNIKVRIDQIKKQIEDATSDYDREKLQERVAKLAGGVAVIKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARSSIKELKG--DNPDQDAGIKIVLRAIEEPLRQIVANAGDEPSVVVNKVLEGTGNYGYNASNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_GEOSF (60 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 108/238 (45.38%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIA++TG +  + ++G  +ENT+++ LG A+K+TI KD+TTII  A ++ +I  R+  ++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATE E++++K R+EDA +AT AA++EGIVPGGG A +     + A+    E   ++ G +++++AL  P   IA NA              +   GYNA  D+Y +M+QAG+IDP KV+R ALQNA+S+AG++LTT+A++ +
Sbjct:  287 MLEDIAVLTGGKVISEEVGFKLENTTMDMLGQAKKITIDKDNTTIIDGAGAEGDIAGRVKMIRAQIEETSSDYDREKLQERLAKLVGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVDEGIVPGGGVAYLRAMSTLDALNLPTE---QQFGVNVIKRALEEPIRQIAQNAGVDGSIVVDKVKNGKDAFGYNAADDEYVDMIQAGIIDPTKVSRSALQNASSIAGLMLTTEAMIAD 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_FRAP2 (60 kDa chaperonin OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 114/238 (47.90%), Postives = 159/238 (66.81%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TGA   + DLG+ +E  ++E LGTA +V + KD TTII  A +KD I  R+ QLK  +AE  S YD EKL ER+AKLSGGVAVI+VGA TE E++++K R++DA +AT AA+EEGIV GGG AL+     +  +    ++ D+  G  +++KA+ AP   I  NA            A E   GYNA  D Y +M++ G++DP KVTR ALQ+AAS+AG+++TT+A+V E
Sbjct:  288 MLEDIAILTGATVISEDLGMKLEEANMEHLGTASRVQVSKDDTTIIDGAGNKDAIVNRVNQLKANVAEATSDYDKEKLQERLAKLSGGVAVIRVGAVTEAEMKEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGLVG--DNDDQNHGIALLKKAIEAPLRQIVSNAGGESSVVVNEVKAKEGNYGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVAE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CAMJR (60 kDa chaperonin OS=Campylobacter jejuni (strain RM1221) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 123/245 (50.20%), Postives = 164/245 (66.94%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG E  + +LG  +E+ +++ LG A  V I KD+TTI+  A  K  I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+         K KL+   DE +GA IV++AL AP   IA NA             A +  TG++A   +Y NML++G+IDP KV R AL NA SVA M+LTT+A + E +  K
Sbjct:  287 MLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDK 526          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CAMJJ (60 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 123/245 (50.20%), Postives = 164/245 (66.94%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG E  + +LG  +E+ +++ LG A  V I KD+TTI+  A  K  I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+         K KL+   DE +GA IV++AL AP   IA NA             A +  TG++A   +Y NML++G+IDP KV R AL NA SVA M+LTT+A + E +  K
Sbjct:  287 MLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDK 526          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_GLUDA1.854e-5445.9060 kDa chaperonin 1 OS=Gluconacetobacter diazotrop... [more]
CH601_CORJK1.854e-5449.3860 kDa chaperonin 1 OS=Corynebacterium jeikeium (s... [more]
CH60_RICCK2.421e-5446.4060 kDa chaperonin OS=Rickettsia canadensis (strain... [more]
CH60_PSEF52.421e-5444.9660 kDa chaperonin OS=Pseudomonas fluorescens (stra... [more]
CH60_NOVAD2.421e-5447.9560 kDa chaperonin OS=Novosphingobium aromaticivora... [more]
CH60_METFK2.421e-5448.3260 kDa chaperonin OS=Methylobacillus flagellatus (... [more]
CH60_GEOSF2.421e-5445.3860 kDa chaperonin OS=Geobacter sp. (strain FRC-32)... [more]
CH60_FRAP22.421e-5447.9060 kDa chaperonin OS=Francisella philomiragia subs... [more]
CH60_CAMJR2.421e-5450.2060 kDa chaperonin OS=Campylobacter jejuni (strain ... [more]
CH60_CAMJJ2.421e-5450.2060 kDa chaperonin OS=Campylobacter jejuni subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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