EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BORT9 (60 kDa chaperonin OS=Borrelia turicatae (strain 91E135) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 111/243 (45.68%), Postives = 165/243 (67.90%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG  F + +LGL +EN  +EQLG A+ V + KD+TTII +  +K++I+ R   +KK++ ET S YD EKL ER+AKL GGVAVI VGA TE EL+++K R+EDA +AT AA+EEG+VPGGG+ L+ ++ ++  +       +E+ G +IV+++L  P   I  NA              +   G++A + K+ NM+++G+IDPAKVTR ALQNAAS+AG++LTT+  + E +  K
Sbjct:  287 MLEDIAILTGGVFVSEELGLTLENVELEQLGQAKSVKVDKDNTTII-NTGNKEQIKERAELIKKQIEETSSEYDKEKLQERLAKLVGGVAVINVGAVTELELKEKKHRVEDALSATRAAVEEGVVPGGGSTLIEVAMYLDTVDTSKLSYEEKQGFEIVKRSLEEPMRQIIANAGFESSIYIHQIKTDKKGLGFDAASFKWVNMIESGIIDPAKVTRSALQNAASIAGLLLTTECAITEVKEEK 528          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_ACICJ (60 kDa chaperonin OS=Acidiphilium cryptum (strain JF-5) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 113/244 (46.31%), Postives = 170/244 (69.67%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG +  + DLG+ +E  ++  LG A+KV I K++TTI+  A  K +I  R  Q++ ++ ET S YD EKL ER+AKL+GGVAVI+VG A+ETE+++RK R++DA +AT AA+EEGIVPGGG AL   S  +   K K ++ D+R G DI++KA++AP   IA NA             + +++ G++A + ++++M++AG+IDP KV R ALQ+AASVAG+++TT+A+V E    K
Sbjct:  288 MLEDIAILTGGQVISEDLGIKLETVTLNMLGRAKKVLIEKENTTIVEGAGKKADITGRCNQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGASETEVKERKDRVDDALHATRAAVEEGIVPGGGVALARAS--LAINKLKADNDDQRFGIDIIRKAVLAPMRQIAENAGEDGAVISGKVLDNDDYSFGFDAQSGEFKDMVKAGIIDPTKVVRTALQDAASVAGLLITTEAMVAERPEKK 529          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_RHOPS (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL2 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 115/239 (48.12%), Postives = 168/239 (70.29%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG +  + +LG+ +E+ +++ LG A+KV I K++TTI+  A  K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+     V  I +  ++AD + G +IV KAL AP   IA NA             ++  T G++A T++Y +ML  G++DPAKV R ALQ+AASVA +++TT+A+V E
Sbjct:  288 MLEDIAILTGGQLISEELGVKLESVTLKMLGRAKKVVIDKENTTIVNGAGKKADIEARVQQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRINN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAASVAALLVTTEAMVAE 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_PROM2 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL1 PE=3 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 113/242 (46.69%), Postives = 163/242 (67.36%), Query Frame = 1
Query:   19 LQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            L+DIAI+TGA+  + D  + ++  S+  LG A+K+TI KD TTIIA   +KD ++AR+ +LK+E+  TDS YD +K+ ERIAKL+GGVA+IKVGAATETE++ +KLRIED+ NAT AAIEEG+VPGGG  L+ +SD +  +     D D R G +I+++AL+ P   IA NA                  G+NA + KYE++  +G++DP KV R ALQ++ S+A M+LTT+  + +   P+
Sbjct:  287 LEDIAILTGAKLISEDKSMTLDKVSINDLGKAKKITITKDKTTIIAFEDTKDLVKARVEKLKREVDMTDSEYDQDKINERIAKLAGGVALIKVGAATETEMKYKKLRIEDSLNATKAAIEEGVVPGGGQTLIEISDDLLNLSQTSSD-DLRTGINIIKEALLEPTKQIAKNA--GFNGDVVIAEIKRLNKGFNANSGKYEDLKNSGILDPTKVIRLALQDSVSIAAMLLTTEVAIADIPEPE 525          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_MYCGI (60 kDa chaperonin 1 OS=Mycobacterium gilvum (strain PYR-GCK) GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 119/238 (50.00%), Postives = 153/238 (64.29%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQD+AI+TG +  + ++GL +E   V  LGTARKV + KD TTI+  A   D I  R+AQ++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+      P ++D     DE  GA+IV+ AL AP   IA N                   G NA T +YE++L+AGV DP KVTR ALQNAAS+A + LTT+A+V +
Sbjct:  286 MLQDMAILTGGQVVSEEVGLSLETADVALLGTARKVVVTKDETTIVEGAGDSDAIAGRVAQIRAEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALL---QSAPVLEDLGLSGDEATGANIVRVALSAPLKQIAFNGGLEPGVVAEKVSNLPAGHGLNAATGEYEDLLKAGVADPVKVTRSALQNAASIAALFLTTEAVVAD 520          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.421e-54
Identity = 115/239 (48.12%), Postives = 166/239 (69.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG +  + DLG+ +EN +++ LG A+KV I K++TTI+  A  K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+     V  I +   ++D + G +IV KAL AP   IA NA              +  T G++A ++ Y +M+  G+IDPAKV R ALQ+A+SVAG+++TT+A+V E
Sbjct:  288 MLEDIAILTGGQLISDDLGMKLENVTIKMLGRAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRITN--PNSDVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIIDPAKVVRTALQDASSVAGLLVTTEAMVAE 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_TERTT (60 kDa chaperonin OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 113/244 (46.31%), Postives = 167/244 (68.44%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +LQDIAI+TG    + ++GL +E+ ++E LG A++ T+ K+++ I+  A S D+I+AR+ Q++K++ ET S YD+EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG +L+     V AI D + E+ D+  G  I ++A+ AP   I  NA              E   GYNA +  Y +ML+ G++DPAKVTR ALQ A S+AG+++TT+A+V +    K
Sbjct:  288 MLQDIAILTGGTVISEEVGLDLESATLEHLGQAKRFTMSKENSVIVDGAGSADDIKARVNQIRKQIEETSSEYDAEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVSLMRA---VAAIADLQGENEDQTAGVAIARRAMEAPLRQIVTNAGEEASVVAEKVRGGEGNFGYNAGSGVYGDMLEMGILDPAKVTRTALQAAGSIAGLMITTEAMVADKPEDK 528          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_SHEFN (60 kDa chaperonin OS=Shewanella frigidimarina (strain NCIMB 400) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 111/238 (46.64%), Postives = 165/238 (69.33%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQD+AI+TG    A ++GL +E  ++E LGTA++V I KD+TTII  +  + +I AR++Q+K+++ ++ S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++  +  +  ++ + D++ G  I  +A+ AP   IA NA              E   GYNA  D Y +ML+ G++DP KVTR ALQ AAS+AG+++TT+A++ E
Sbjct:  288 MLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDNTTIIDGSGDQVQISARVSQIKQQVEDSTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIKDV--EVLNEDQKHGVVIALRAMEAPLRQIATNAGQEASVVANTVKNGEGNFGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMIAE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_RICAH (60 kDa chaperonin OS=Rickettsia akari (strain Hartford) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 113/244 (46.31%), Postives = 165/244 (67.62%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +++DIAI+T  E    DLG+ +EN S++ LGTA++VT+ K++T I+  +  K  I+ R+ Q+K ++AET S YD EKL ER+AKLSGGVAV+KVG ATE E+++RK R+EDA  AT AA+EEG+V GGG  L+H S  +   K K+E+ D++ G +IV +AL  P   I  NA              ++   G+NA   +Y +M++AG+IDPAKV R ALQ+AASVA +++TT+ ++V+  S K
Sbjct:  288 MMEDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTVSKENTVIVDGSGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQTL--TKLKVENKDQQAGIEIVIEALKDPLKQIIENAGENGGVVVGKLLEHNDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDK 529          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_RHOCA (60 kDa chaperonin OS=Rhodobacter capsulatus GN=groL PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 114/244 (46.72%), Postives = 165/244 (67.62%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +LQDIAI+TG +  + DLG+ +EN +++ LG A+KVTI K++TTI+     K EI AR+A ++ ++ ET S YD EKL ER+AKL+GGVAVI+VG  TE E+++RK R++DA NAT AA++EGI+ GGG ALV  +  +  +     ++D+  G  IV++AL AP   IA NA             S +   G+NA T++Y +M   GVIDPAKVTR AL++AAS+AG+++TT+ ++ E   PK
Sbjct:  288 MLQDIAILTGGQVISDDLGMKLENVTLDMLGRAKKVTISKENTTIVDGHGDKAEINARVAHIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIIVGGGVALVQAAKKLNDLTG--ANSDQDAGISIVRRALEAPLRQIAENAGVDGAVVAGKVRESADPAFGFNAQTEEYGDMFGFGVIDPAKVTRTALEDAASIAGLLITTECMIAEKPEPK 529          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BORT92.421e-5445.6860 kDa chaperonin OS=Borrelia turicatae (strain 91... [more]
CH60_ACICJ2.421e-5446.3160 kDa chaperonin OS=Acidiphilium cryptum (strain ... [more]
CH602_RHOPS2.421e-5448.1260 kDa chaperonin 2 OS=Rhodopseudomonas palustris ... [more]
CH601_PROM22.421e-5446.6960 kDa chaperonin 1 OS=Prochlorococcus marinus (st... [more]
CH601_MYCGI2.421e-5450.0060 kDa chaperonin 1 OS=Mycobacterium gilvum (strai... [more]
CH601_BRASB2.421e-5448.1260 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ... [more]
CH60_TERTT3.162e-5446.3160 kDa chaperonin OS=Teredinibacter turnerae (stra... [more]
CH60_SHEFN3.162e-5446.6460 kDa chaperonin OS=Shewanella frigidimarina (str... [more]
CH60_RICAH3.162e-5446.3160 kDa chaperonin OS=Rickettsia akari (strain Hart... [more]
CH60_RHOCA3.162e-5446.7260 kDa chaperonin OS=Rhodobacter capsulatus GN=gro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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