EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PYRSA (60 kDa chaperonin, chloroplastic OS=Pyrenomonas salina GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 117/240 (48.75%), Postives = 164/240 (68.33%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQ 735
            +L+DIAI+TG +  + D G  +E   ++ LG AR++T+ K+ TTIIA+   + E++AR  Q+++++  ++S Y+ EKL ER+AKL+GGVAVIKVGAATETE +D+KLR+EDA NAT AA+EEGIVPGG   +  + D     +D L D DE +GA IV+KAL AP   I  N               +++ GYNA   + E+M + GVIDPAKVTR A+QNAAS+A M+LTT+ IVV+ +
Sbjct:  317 MLEDIAILTGGQVISEDAGFSLETVQLDMLGQARRITVVKEGTTIIAEGHER-EVKARCEQIRRQIEASESSYEREKLQERLAKLAGGVAVIKVGAATETE-KDKKLRLEDAINATKAAVEEGIVPGGATLIHFIEDLNDWAEDNLLD-DELIGALIVEKALSAPMKRIIENTGISSSIIIEKIKDKDFSIGYNAAQGEIEDMYEIGVIDPAKVTRSAMQNAASIASMILTTECIVVDKK 553          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PSEST (60 kDa chaperonin OS=Pseudomonas stutzeri GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 109/249 (43.78%), Postives = 166/249 (66.67%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +LQDIAI+TG    + ++GL +E  ++E LG A++V + K++TTII  A  + +I+AR+AQ++K++ +T S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R+EDA +AT AA+EEG+VPGGG A V     +  +K   E+ D+ +G  ++++A+ AP   I  NA              E   G+NA +D Y +M++ G++DPAKVTR ALQ AAS+  +++TT+A++ E    K    +P
Sbjct:  288 MLQDIAILTGGTVISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGQQADIEARVAQIRKQVEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAWVRALQAISELKG--ENEDQNVGIALLRRAVEAPLRQIVTNAGGEPSVVVDKVKQGEGNYGFNAASDTYGDMIEMGILDPAKVTRSALQAAASIGSLMITTEAMIAEVAEDKAAGGMP 534          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_PELCD (60 kDa chaperonin OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 110/238 (46.22%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG +  + ++G  +EN +++ LG A+++ I K+++TII  A S+ +IQ R+ Q++ ++ ET S YD EKL ER+AKL GGVAV+KVGAATETE++++K R+EDA +AT AA+EEGIVPGGG AL+     + AI+      ++  G +IV++A+  P   I+ NA                T G+NA  D+Y +M++AG+IDP KV R ALQNA+SVAG++LTT+A + E
Sbjct:  288 MLEDIAILTGGKVISEEVGFKLENATIDMLGNAKRIVIDKENSTIIDGAGSEVDIQGRVKQIRAQIEETKSDYDREKLQERLAKLVGGVAVVKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRC---IKAIESLDLPGEQNWGVNIVKRAMEEPLRQISANAGAEGSIVVNQVRGGADTYGFNAAADEYCDMIEAGIIDPTKVVRSALQNASSVAGLMLTTEACIAE 522          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_MARAV (60 kDa chaperonin OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 109/241 (45.23%), Postives = 168/241 (69.71%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVH---LSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+TG    + ++GL +ENT+++ LGTA++V + K++TTII  A ++ +I AR+ Q++K++ ++ S YD EKL ER+AKL+GGVAVIKVGA +E E++++K R+EDA ++T AA+EEGIV GGG  L+      D V AI D     +++ G +I+++A+ AP   I  NA              E + G+NA T++Y +ML+ G++DPAKVTR +LQ AASVA +++TT+A+V +
Sbjct:  288 MLQDIAILTGGTVISEEVGLTLENTTLDDLGTAKRVNVTKENTTIIGGAGAEADISARVEQIRKQIEDSSSDYDKEKLQERVAKLAGGVAVIKVGAGSEVEMKEKKARVEDALHSTRAAVEEGIVAGGGVTLIRAIAALDKVDAIND-----EQKAGVNILRRAMEAPLRQIVFNAGGESSVVVAKVKEGEGSFGFNAATEQYGDMLEMGILDPAKVTRSSLQAAASVASLIITTEAMVAD 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_CAMJD (60 kDa chaperonin OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 122/245 (49.80%), Postives = 164/245 (66.94%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG E  + +LG  +E+ +++ LG A  V I KD+TT++  A  K  I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+         K KL+   DE +GA IV++AL AP   IA NA             A +  TG++A   +Y NML++G+IDP KV R AL NA SVA M+LTT+A + E +  K
Sbjct:  287 MLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTVVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDK 526          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BURMS (60 kDa chaperonin OS=Burkholderia mallei (strain SAVP1) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 116/249 (46.59%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + ++     +AD+  G  IV +A+  P   I  N             A +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E   PK   P+P
Sbjct:  288 MLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAE--LPKEDAPMP 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BURMA (60 kDa chaperonin OS=Burkholderia mallei GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 116/249 (46.59%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + ++     +AD+  G  IV +A+  P   I  N             A +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E   PK   P+P
Sbjct:  288 MLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAE--LPKEDAPMP 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BURM9 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10229) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 116/249 (46.59%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + ++     +AD+  G  IV +A+  P   I  N             A +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E   PK   P+P
Sbjct:  288 MLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAE--LPKEDAPMP 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BURM7 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10247) GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 116/249 (46.59%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + ++     +AD+  G  IV +A+  P   I  N             A +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E   PK   P+P
Sbjct:  288 MLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAE--LPKEDAPMP 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BLOFL (60 kDa chaperonin OS=Blochmannia floridanus GN=groL PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 111/239 (46.44%), Postives = 163/239 (68.20%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+T     + ++GL +E  ++E +G A++V I KD+TTII    +K  I +R+AQ+ ++  E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG AL+ +++   AI++   D  D+ +G  + ++A+ AP   I  NA            + E  TGYNA T+KY NM++ G++DP KVTR ALQ AAS+AG+++TT+ +V E
Sbjct:  288 MLQDIAILTSGTVISEEIGLELEKATLEDMGQAKRVLITKDATTIIDGVGNKSSIDSRVAQINQQRDEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVAN---AIRNLCGDNEDQNVGIKVARRAMEAPLRQIMANAGEEPSVIANNVRSGEGNTGYNAATEKYGNMIELGILDPTKVTRSALQYAASIAGLMITTECMVTE 523          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_PYRSA3.162e-5448.7560 kDa chaperonin, chloroplastic OS=Pyrenomonas sa... [more]
CH60_PSEST3.162e-5443.7860 kDa chaperonin OS=Pseudomonas stutzeri GN=groL ... [more]
CH60_PELCD3.162e-5446.2260 kDa chaperonin OS=Pelobacter carbinolicus (stra... [more]
CH60_MARAV3.162e-5445.2360 kDa chaperonin OS=Marinobacter aquaeolei (strai... [more]
CH60_CAMJD3.162e-5449.8060 kDa chaperonin OS=Campylobacter jejuni subsp. d... [more]
CH60_BURMS3.162e-5446.5960 kDa chaperonin OS=Burkholderia mallei (strain S... [more]
CH60_BURMA3.162e-5446.5960 kDa chaperonin OS=Burkholderia mallei GN=groL P... [more]
CH60_BURM93.162e-5446.5960 kDa chaperonin OS=Burkholderia mallei (strain N... [more]
CH60_BURM73.162e-5446.5960 kDa chaperonin OS=Burkholderia mallei (strain N... [more]
CH60_BLOFL3.162e-5446.4460 kDa chaperonin OS=Blochmannia floridanus GN=gro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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