EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:225..1115. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 110/244 (45.08%), Postives = 165/244 (67.62%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+DIAI+TG E  + DLG+ +E+ ++ QLG AR++ I KD+TTI+      D I+ R+ Q++ ++ ET S YD EKL ER+AKL+GGVA+I+VG +TE E+++RK R++DA NAT AA+EEGIVPGGG AL   ++ V  +  +  + D+R+G DIV+KAL AP   IA NA             +  +  G++A   ++++++ AG+IDP KV R ALQ+AASV  +++TT+ +V E   PK
Sbjct:  288 ILEDIAILTGGEVISEDLGIKLESVTLSQLGQARRIVIDKDNTTIVDGEGDADAIKGRVGQIRAQIEETTSDYDREKLQERLAKLAGGVAIIRVGGSTEIEVKERKDRVDDALNATRAAVEEGIVPGGGTALARAAEVVARL--QFHNDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPK 529          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH602_CHLAA (60 kDa chaperonin 2 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=groL2 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 117/248 (47.18%), Postives = 164/248 (66.13%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWT-----TGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +LQDIAI+TG    + ++G  +E+ +++ LG AR+V   KD+T I+     K  IQARIAQLK+++  T S YD EKL ER+AKLSGGVAVIKVGA TE  +++RK R+EDA NAT AA+EEGIVPGGG AL++    +  +  + E  +ER+  +++++AL  P   +A NA              +        GY+ MT  Y +++QAG+IDPAKV R AL+NA SVAGMVLTT+A++V++  PK
Sbjct:  287 MLQDIAILTGGTVISEEIGRKLESATLQDLGRARRVKADKDNTVIVEGHGDKQAIQARIAQLKQQIETTTSDYDREKLQERVAKLSGGVAVIKVGAPTEPAMKERKARVEDALNATRAAVEEGIVPGGGVALLNAIPALDNVTTQFE--EERMALNVLRRALEEPLRQLATNAGEDGSVVVENVRNEQRKHNNNHYGYDVMTGTYVDLMQAGIIDPAKVVRSALENAISVAGMVLTTEALIVDAPEPK 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_STRAW (60 kDa chaperonin 1 OS=Streptomyces avermitilis GN=groL1 PE=3 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 116/239 (48.54%), Postives = 161/239 (67.36%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKL-EDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L DIA +TG +  A ++GL ++   ++ LGTAR+VT+ KD TTI+    S DE+  RI Q+K E+  TDS +D EKL ER+AKL+GGV VIKVGAATE EL+++K R+EDA +AT AA+EEGIV GGG+ALVH    V  ++  L +  DE  G  +V++A V P   IA NA              +   G+NA T +Y +++++GVIDP KVTR AL+NAAS+A ++LTT+ +VVE
Sbjct:  288 MLGDIATLTGGQVIAEEVGLKLDQVGLDVLGTARRVTVTKDDTTIVDGGGSSDEVAGRINQIKAEIENTDSDWDREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALVHA---VKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNAATGEYGDLVKSGVIDPVKVTRSALENAASIASLLLTTETLVVE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_SPHAL (60 kDa chaperonin 1 OS=Sphingopyxis alaskensis GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 118/249 (47.39%), Postives = 164/249 (65.86%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PL 759
            +LQDIAI+T  E  + DLG+ +EN ++  LG A++VTI KD+TTI+  A   + I+ R+ Q++ ++  T S YD EKL ER+AKL+GGVAVIKVG ATE E+++RK R++DA +AT AA+EEGIVPGGG AL++ +  +  +K    + D+  G DI++KA+  P   IA NA               +   G+NA TD YEN+  AGVIDP KV R ALQ+AASVAG+++TT+A V E    K   P+
Sbjct:  288 MLQDIAILTKGEMISEDLGIKLENVTLNMLGQAKRVTIDKDNTTIVDGAGDAEAIKGRVEQIRAQIETTTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALEGLKG--ANDDQTRGIDIIRKAIETPLRQIAANAGHDGAVVAGNLLRVGDVEQGFNAATDVYENLKAAGVIDPTKVVRTALQDAASVAGLLITTEAAVSELPEDKPAMPM 534          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 120/239 (50.21%), Postives = 162/239 (67.78%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADER-LGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TGA     DLG  +E+ +V  LGTA++V I KD+T I+     K  I+ RI  ++K++A+T S YD EKL ER+AKL+GGVAV+KVGAATETE++++K R+EDA +AT AA+EEGIV GGG AL   +    A  + L+  DER +G  +V++A+ AP   IA NA            +   T GYNA TD YE++L  GVIDPAKV R A+ NAASVA ++LTT+A+V E
Sbjct:  288 MLKDIAILTGATPFMEDLGQKLESATVRDLGTAKRVEIDKDNTVIVDGQGDKTAIKGRIEAIRKQIADTTSDYDREKLQERLAKLAGGVAVVKVGAATETEMKEKKARVEDALHATRAAVEEGIVVGGGVALFRAA----ASLESLKFNDERDVGVRLVRRAVEAPLRQIAQNAGVDGTVVAEKVRSGAPTFGYNAATDSYEDLLAGGVIDPAKVVRHAISNAASVAALMLTTEALVAE 522          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_RENSM (60 kDa chaperonin 1 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groL1 PE=3 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 119/237 (50.21%), Postives = 154/237 (64.98%), Query Frame = 1
Query:   19 LQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            L DIAI+TG +  + ++GL +EN +V+ LG ARKV + KD TTI+  A   ++I  R+AQ++ E+  TDS YD EKL ER+AKL+GGVAVIK G+ATE EL++RK RIEDA     AA+EEGIVPGGG AL+     V A +    + DE  GA+IV+ A+ AP   IA NA                  G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+ +V +
Sbjct:  287 LADIAILTGGQVISEEVGLSLENATVDLLGQARKVVVTKDETTIVEGAGDAEQIAGRVAQIRAEIENTDSDYDREKLQERLAKLAGGVAVIKAGSATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQAG--VKAFETLQLEGDEATGANIVKVAIDAPLKQIAINAGLEPGVVVDKVRGLPVGHGLNAATGVYEDLLAAGVNDPVKVTRSALQNAASIAGLFLTTEVVVAD 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_BURP1 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1710b) GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 116/249 (46.59%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + ++     +AD+  G  IV +A+  P   I  N             A +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E   PK   P+P
Sbjct:  288 MLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAE--LPKEDAPMP 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_BURP0 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1106a) GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.162e-54
Identity = 116/249 (46.59%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + ++     +AD+  G  IV +A+  P   I  N             A +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E   PK   P+P
Sbjct:  288 MLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAE--LPKEDAPMP 532          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_WIGBR (60 kDa chaperonin OS=Wigglesworthia glossinidia brevipalpis GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.130e-54
Identity = 107/238 (44.96%), Postives = 162/238 (68.07%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAI+T     + ++GL +E +++E +G A++V I KD+TTII    +K  I +R++Q+ +E  E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG AL+ +++ +  ++   E+ D+ +G  + ++A+ AP   I  NA            A E  TGYNA T+ Y NM+  G++DP KVTR ALQ AAS+AG+++TT+ ++ +
Sbjct:  288 MLQDIAILTSGTVISEEMGLDLEKSTLEDMGQAKRVVITKDTTTIIDGTGNKSMISSRVSQINQERDEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVANRIVNLRG--ENEDQNVGIRVARRAMEAPLRQIVANAGEEPSVIANKVKAGEGNTGYNAATEVYGNMIDMGILDPTKVTRSALQYAASIAGLMITTECMITD 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BUCCC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Cinara cedri GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.130e-54
Identity = 110/238 (46.22%), Postives = 163/238 (68.49%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDI+I+TG    + +L + +E +S+E LG A++V I KD+TTII    +K+ I++RI+Q+++E+ E  S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV +++ +  I  + E  D+ +G  +  +A+ AP   I  N+                  GYNA TD+Y +M+  G++DP KVTR ALQ AASVAG+++TT+ +V +
Sbjct:  288 MLQDISILTGGSVISEELAMDLEKSSLEDLGQAKRVVINKDTTTIIDGNGNKEAIKSRISQIRQEINEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVAEKISRINGQNE--DQNVGIRVALRAMEAPLRQIVANSGEEPSVVTNNVKDGHGNYGYNAATDEYGDMISFGILDPTKVTRSALQYAASVAGLMITTECMVTD 523          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_GLUDA3.162e-5445.0860 kDa chaperonin 2 OS=Gluconacetobacter diazotrop... [more]
CH602_CHLAA3.162e-5447.1860 kDa chaperonin 2 OS=Chloroflexus aurantiacus (s... [more]
CH601_STRAW3.162e-5448.5460 kDa chaperonin 1 OS=Streptomyces avermitilis GN... [more]
CH601_SPHAL3.162e-5447.3960 kDa chaperonin 1 OS=Sphingopyxis alaskensis GN=... [more]
CH601_SORC53.162e-5450.2160 kDa chaperonin 1 OS=Sorangium cellulosum (strai... [more]
CH601_RENSM3.162e-5450.2160 kDa chaperonin 1 OS=Renibacterium salmoninarum ... [more]
CH601_BURP13.162e-5446.5960 kDa chaperonin 1 OS=Burkholderia pseudomallei (... [more]
CH601_BURP03.162e-5446.5960 kDa chaperonin 1 OS=Burkholderia pseudomallei (... [more]
CH60_WIGBR4.130e-5444.9660 kDa chaperonin OS=Wigglesworthia glossinidia br... [more]
CH60_BUCCC4.130e-5446.2260 kDa chaperonin OS=Buchnera aphidicola subsp. Ci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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