EY661477

Overview
NameEY661477
Unique NameEY661477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_STAA2 (60 kDa chaperonin OS=Staphylococcus aureus (strain JH1) GN=groL PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.500e-59
Identity = 123/236 (52.12%), Postives = 168/236 (71.19%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIV 723
            +L+D+AI+TGA+    DLGL +++ S++ LGTA KV + KD+TT++     ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+AG++DP KVTR ALQ+AASVA M LTT+A+V
Sbjct:  286 MLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVV 518          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_STAA1 (60 kDa chaperonin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=groL PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.500e-59
Identity = 123/236 (52.12%), Postives = 168/236 (71.19%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIV 723
            +L+D+AI+TGA+    DLGL +++ S++ LGTA KV + KD+TT++     ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+AG++DP KVTR ALQ+AASVA M LTT+A+V
Sbjct:  286 MLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVV 518          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_OCEIH (60 kDa chaperonin OS=Oceanobacillus iheyensis GN=groL PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.500e-59
Identity = 120/238 (50.42%), Postives = 165/238 (69.33%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIA++TGAE    DLGL +++ S++QLG A KV + K++TT++  +   + I +R+AQ++ +  E+ S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T A +EEG+VPGGG ALV++   V    +   + DE  GA IV +AL  P   I HNA              +   GYNA TD++ NM++AG++DP KVTR ALQNAASVA M LTT+A+V +
Sbjct:  286 MLEDIAVLTGAEVITEDLGLDLKSASIDQLGRASKVVVTKENTTVVEGSGDPEAISSRVAQIRAQAEESTSDFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAGVEEGMVPGGGTALVNIHRQV---SELTLEGDEATGASIVLRALEEPVRQIVHNAGLEGSIIVERLKGEKVGIGYNAATDEWVNMVEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVAD 520          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_LACPL (60 kDa chaperonin OS=Lactobacillus plantarum GN=groL PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.265e-59
Identity = 121/237 (51.05%), Postives = 166/237 (70.04%), Query Frame = 1
Query:   19 LQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            LQDIAI+TG      DLGL +++T+++QLG A KVT+ KD+TTI+  A SKD I  R+  ++ ++ ET S +D EKL ER+AKL+GGVAV++VGAATETEL++RK RIEDA NAT AA+EEG V GGG AL+++   V A+K   E  D + G +IV++AL  P   IA NA              +   G+NA TD++ +M++AG++DP KVTR ALQNAASV+ ++LTT+A+V E
Sbjct:  287 LQDIAILTGGTVITDDLGLELKDTTIDQLGQANKVTVTKDNTTIVEGAGSKDAISERVEFIRNQIGETTSDFDKEKLQERLAKLAGGVAVVRVGAATETELKERKYRIEDALNATRAAVEEGFVAGGGTALINVIKDVAALK---ETGDVQTGINIVKRALEEPVRQIAENAGLEGSVIVEKMKEQKPGVGFNAATDEWVDMIKAGIVDPTKVTRSALQNAASVSALLLTTEAVVAE 520          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_HALOH (60 kDa chaperonin OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=groL PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.265e-59
Identity = 120/240 (50.00%), Postives = 164/240 (68.33%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQ 735
            +L+DIAI+TG +    DLGL +EN  +  LG A KVT+ K+ TTI+  A    EIQ RI Q++ ++  TDS +D EKL ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEG+V GGG  L+   D +PA+ +   + DE  G DIV+KAL AP  LIA NA            + +   G++A   ++ NM+++G++DPAKVTR ALQNAAS A M+LTT+ +V + +
Sbjct:  287 MLEDIAILTGGQVITEDLGLKLENADISMLGRAHKVTVTKEDTTIVEGAGDSKEIQNRIKQIRTQIENTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGLVAGGGTTLI---DAIPALDELNLEGDEATGVDIVRKALEAPVRLIADNAGYEGSVIVEKVKSEDKGIGFDAYNGEFVNMIESGIVDPAKVTRSALQNAASAAAMLLTTECLVADKE 523          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_COPPD (60 kDa chaperonin OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=groL PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.265e-59
Identity = 125/239 (52.30%), Postives = 169/239 (70.71%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +LQDIAIVTG +  + +LG+  E+ + +  G AR V + K+STTI+    S +EI+ RIAQ++K+L  T+S Y+ EKL ER+AKL+GGVAVIKVGAATETE++++K R+EDA +AT AA+EEGIV GGG  LV  S     + DKL  + DE +GA IV+KAL+ PA +IA NA              E+  G++A+  +Y +M +AG+IDP KVTR ALQNAAS+A MVLTT+A+VVE
Sbjct:  287 MLQDIAIVTGGQVISEELGVSFESVTPDMFGHARSVKVDKESTTIVGGKGSSEEIEKRIAQIRKQLETTESEYEKEKLQERLAKLAGGVAVIKVGAATETEMKEKKHRVEDAVSATKAAMEEGIVAGGGVTLVKAS----TVLDKLPLENDELIGATIVKKALMEPARVIAENAGFAGEVVVEELKKREYPVGFDAVKGEYVDMFEAGIIDPTKVTRSALQNAASIAAMVLTTEALVVE 521          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.265e-59
Identity = 121/238 (50.84%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 729
            +L+DIAI+TG +    DLGL +++ ++E LG A KV + K++TTI+  A   ++I  R+ QLK ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++   + A+K      DE  G +IV +AL  P   IAHNA            A E   GYNA T +Y NM++ G++DP KVTR ALQNAASV+ M LTT+A++ +
Sbjct:  286 MLEDIAILTGGQVITEDLGLDLKSATIESLGRAAKVVVTKENTTIVEGAGDPEQISGRVNQLKAQVEETTSEFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVKAVDATGDEATGVNIVLRALEEPVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSALQNAASVSAMFLTTEAVIAD 520          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_STAEP (60 kDa chaperonin OS=Staphylococcus epidermidis GN=groL PE=3 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 4.264e-59
Identity = 123/243 (50.62%), Postives = 166/243 (68.31%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPK 744
            +L+D+AI+TGA+    DLGL +++ S++ LGTA KV + KD TT++     ++ I AR+ Q+K ++ ETDS  D EKL ER+AKL+GGVAVIKVGAA++TEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  IK    + D   G +IV KAL AP   IA NA             +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+V     P+
Sbjct:  286 MLEDLAILTGAQVITDDLGLELKDASLDMLGTANKVEVTKDHTTVVDGNGDENNIDARVGQIKAQIEETDSECDKEKLQERVAKLAGGVAVIKVGAASDTELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEPE 525          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.264e-59
Identity = 121/241 (50.21%), Postives = 167/241 (69.29%), Query Frame = 1
Query:   19 LQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSP 741
            L DIA++TG +  + D  + ++  ++E LG AR++TI KDSTTI+A   SK+ + AR+A +K+EL  TDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AA+EEGIV GGG+ L+H+S  + A+   LE  D++ G +IVQ+AL AP   IA NA             S    G+NA+T  +E+++ AG++D +KV R ALQ+A S+A +V+TT+ +V +   P
Sbjct:  287 LADIAVLTGGQVISEDRAMTLDKVTMEDLGRARRITISKDSTTIVASDDSKEAVSARVASIKRELDNTDSEYDQEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLHISAELDALTSGLE-GDQKTGVEIVQRALSAPLRQIAENAGSNGDVVVDRVRNS--GEGFNALTGNFEDLMNAGILDASKVVRLALQDAVSIASLVVTTEVVVADKPEP 524          
BLAST of EY661477 vs. ExPASy Swiss-Prot
Match: CH60_THEYD (60 kDa chaperonin OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=groL PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 7.273e-59
Identity = 125/250 (50.00%), Postives = 170/250 (68.00%), Query Frame = 1
Query:   16 LLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVESQSPKLR*PLP 762
            +L+DIAI+TG    + D+GL +EN  VE LG A+K+ I KD+TTI+  A    +IQARI Q+K ++ ET S YD EKL ER+AKL+GGVA I VGAATE E++++K R+EDA NAT AA+EEGIVPGGG AL+     +  I  K E+ D++LGA+IV+KAL  P   I  NA             ++    GY+A  +K+ +M++AG+IDP KVTR ALQNAASVAG++LTT+ +V E    + + P+P
Sbjct:  288 MLEDIAILTGGTVISEDIGLKLENVKVEDLGKAKKIIIDKDNTTIVEGAGDPQKIQARIKQIKVQIDETTSDYDREKLQERLAKLAGGVARINVGAATEAEMKEKKARVEDALNATRAAVEEGIVPGGGVALLRCQKALEKI--KFENHDQQLGAEIVKKALEEPIKQIIANAGVEATLIVEKVKENKNINYGYDAYAEKFVDMMEAGIIDPTKVTRTALQNAASVAGLMLTTEVLVAEIPEEEKKPPMP 535          
The following BLAST results are available for this feature:
BLAST of EY661477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STAA22.500e-5952.1260 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAA12.500e-5952.1260 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_OCEIH2.500e-5950.4260 kDa chaperonin OS=Oceanobacillus iheyensis GN=g... [more]
CH60_LACPL3.265e-5951.0560 kDa chaperonin OS=Lactobacillus plantarum GN=gr... [more]
CH60_HALOH3.265e-5950.0060 kDa chaperonin OS=Halothermothrix orenii (strai... [more]
CH60_COPPD3.265e-5952.3060 kDa chaperonin OS=Coprothermobacter proteolytic... [more]
CH60_BACSK3.265e-5950.8460 kDa chaperonin OS=Bacillus clausii (strain KSM-... [more]
CH60_STAEP4.264e-5950.6260 kDa chaperonin OS=Staphylococcus epidermidis GN... [more]
CH601_SYNS34.264e-5950.2160 kDa chaperonin 1 OS=Synechococcus sp. (strain C... [more]
CH60_THEYD7.273e-5950.0060 kDa chaperonin OS=Thermodesulfovibrio yellowsto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661477 ID=EY661477; Name=EY661477; organism=Citrus sinensis; type=EST; length=891bp
CGAAAGAAGTAACCTCTCCTTCAAGATATTGCCATTGTGACTGGAGCTGA
GTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAGTTGAGC
AGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACTACCATT
ATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCT
GAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACCTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGCTAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
AAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAGCCAAAGCCCAAAACTCCGG
TAGCCGCTCCCGCACAAAGTCTTATGGTGTAATCTCTAAGACTCTCCAGA
TTTAGTTAGGAGGTTTATAGATGAAAGAGTGGTTTTATTGCGGTGAACTG
AAAAGACAGTTTTTACTAATTGAAATAAAACCGTGTCCTTT
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