EY661163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_BRADI (50S ribosomal protein L33, chloroplastic OS=Brachypodium distachyon GN=rpl33 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22 Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIK 683 MAKGK+VR+RVILEC SCVR G N+ES GISRY T+KNRHNTP +LE +KFC YC KHT H EIK Sbjct: 1 MAKGKDVRIRVILECISCVRKGANEESTGISRYSTEKNRHNTPGQLEFKKFCRYCRKHTTHHEIK 65
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_LOTJA (50S ribosomal protein L33, chloroplastic OS=Lotus japonicus GN=rpl33 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.923e-22 Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIK 683 MAKGK++R+ VILECT C + VNKES GISRYITQKNRHNTPSRLEL KFCP C KH +H EIK Sbjct: 1 MAKGKDIRIIVILECTGCDQKSVNKESSGISRYITQKNRHNTPSRLELIKFCPCCRKHMIHAEIK 65
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_CUSOB (50S ribosomal protein L33, plastid OS=Cuscuta obtusiflora GN=rpl33 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.511e-22 Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIK 683 M K K R +ILECT CVRN N+ S+G+SRYITQKNRHNTP+RLEL+KFCP+CYKH +HGEIK Sbjct: 1 MEKKKGARGNIILECTGCVRNSHNRVSKGVSRYITQKNRHNTPNRLELKKFCPHCYKHIIHGEIK 65
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_JASNU (50S ribosomal protein L33, chloroplastic OS=Jasminum nudiflorum GN=rpl33 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.284e-22 Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 489 MAKGKEV-RVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIK 683 MAKGK+ RVRVILECT CVRN V SRG+SRYITQKNRHNT +LELRKFCPYC+KH +HGEIK Sbjct: 1 MAKGKDAPRVRVILECTGCVRNAV---SRGVSRYITQKNRHNTSKQLELRKFCPYCHKHMIHGEIK 63
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_ZYGCR (50S ribosomal protein L33, chloroplastic OS=Zygnema circumcarinatum GN=rpl33 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.070e-20 Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIK 683 MAK KE+R+ V LECT+C N K SRGISRYITQKNR NTP+RLEL KFCPYC HT+H EIK Sbjct: 1 MAKNKEIRINVTLECTNCANNS-QKSSRGISRYITQKNRRNTPNRLELNKFCPYCVGHTVHKEIK 64
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_PINTH (50S ribosomal protein L33, chloroplastic OS=Pinus thunbergii GN=rpl33 PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 3.070e-20 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKNR 689 MAK ++RV + LECTSC ++ V K GISRY T+KNR NTP RLE KFCPYCYKHT+HGEIK R Sbjct: 1 MAKSGDIRVTITLECTSCTQDSVYKRFPGISRYTTRKNRRNTPIRLESNKFCPYCYKHTIHGEIKKR 67
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_PINKO (50S ribosomal protein L33, chloroplastic OS=Pinus koraiensis GN=rpl33 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.070e-20 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKNR 689 MAK ++RV + LECTSC ++ V K GISRY T+KNR NTP RLE KFCPYCYKHT+HGEIK R Sbjct: 1 MAKSGDIRVTITLECTSCTQDSVYKRFPGISRYTTRKNRRNTPIRLESNKFCPYCYKHTIHGEIKKR 67
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_PELHO (50S ribosomal protein L33, chloroplastic OS=Pelargonium hortorum GN=rpl33 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.839e-20 Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVN----KESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIK 683 MAKGK+ R +V LECT CV+N VN K+S GI RY+TQKN NTPS LELRKFCPYC KHT+HGEIK Sbjct: 1 MAKGKDNRGKVTLECTGCVQNRVNNKKKKKSAGIYRYLTQKNPKNTPSPLELRKFCPYCNKHTIHGEIK 69
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_ANTFO (50S ribosomal protein L33, chloroplastic OS=Anthoceros formosae GN=rpl33 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.290e-18 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIK 683 MAK K++R+ + LECTSC N K G+SRY+++KNR NTP+RLEL+KFCPYCYKH +H EIK Sbjct: 1 MAKSKDIRIAITLECTSCSEND-EKRFSGVSRYVSEKNRRNTPTRLELKKFCPYCYKHKIHREIK 64
BLAST of EY661163 vs. ExPASy Swiss-Prot
Match: RK33_ANGEV (50S ribosomal protein L33, chloroplastic OS=Angiopteris evecta GN=rpl33 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.873e-18 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIK 683 MAK K+VRV + LEC SC RN +K G+SRY T+KN+ NTP+RLEL+KFCPYC +HT+H E+K Sbjct: 1 MAKSKDVRVTITLECISCDRNNSDKRFPGVSRYTTRKNQRNTPTRLELKKFCPYCSEHTIHRELK 65 The following BLAST results are available for this feature:
BLAST of EY661163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661163 ID=EY661163; Name=EY661163; organism=Citrus sinensis; type=EST; length=908bpback to top |