EY661122

Overview
NameEY661122
Unique NameEY661122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_ELEIN (Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.765e-68
Identity = 124/144 (86.11%), Postives = 128/144 (88.89%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISNST   EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+  EG++G    EY
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDEGEEGDEGDEY 451          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA2_MAIZE (Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.306e-68
Identity = 124/144 (86.11%), Postives = 128/144 (88.89%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISNST   EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+  EG++G    EY
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDEGEEGDDGDEY 451          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA2_HORVU (Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.011e-68
Identity = 124/144 (86.11%), Postives = 127/144 (88.19%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP VVPGGDLAKVQRAVCMISNST   EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+  +G+DG    EY
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPGVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDDGEDGDEGDEY 451          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 8.761e-68
Identity = 123/144 (85.42%), Postives = 127/144 (88.19%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST   E+FSR+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE D+E V A+SAEG       EY
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDFEEVGAESAEGAGEGEGEEY 451          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA_DAUCA (Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.144e-67
Identity = 124/144 (86.11%), Postives = 127/144 (88.19%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437
            R GKYMACCLMYRGDVVPKDVNAAV TIKTKRTIQFVDWCPTGFKCGINY  PTVVPGGDLAKVQRAVCMISNST  AEVFSRID KFDLMY+KRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+SAEGDD     +Y
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDTKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGDDEDEGEDY 451          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67
Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSA--EGDDG 419
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISN+T  AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ A  EGD+G
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDEGDEG 447          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67
Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSA--EGDDG 419
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISN+T  AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ A  EGD+G
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDEGDEG 447          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67
Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSA--EGDDG 419
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISN+T  AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ A  EGD+G
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDEGDEG 447          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_HORVU (Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67
Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSA--EGDDG 419
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISN+T  AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ A  EGD+G
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDEGDEG 447          
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA_OXYGR (Tubulin alpha chain OS=Oxytricha granulifera PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.952e-67
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 3
Query:    6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGD 413
            R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKV RAVCMISNST  AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V  ++AEG+
Sbjct:  308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETAEGE 443          
The following BLAST results are available for this feature:
BLAST of EY661122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 376
Match NameE-valueIdentityDescription
TBA1_ELEIN1.765e-6886.11Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 ... [more]
TBA2_MAIZE2.306e-6886.11Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV... [more]
TBA2_HORVU3.011e-6886.11Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 ... [more]
TBA1_VOLCA8.761e-6885.42Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN... [more]
TBA_DAUCA1.144e-6786.11Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 S... [more]
TBA6_MAIZE1.494e-6787.86Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV... [more]
TBA5_MAIZE1.494e-6787.86Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV... [more]
TBA3_ELEIN1.494e-6787.86Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 ... [more]
TBA1_HORVU1.494e-6787.86Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 ... [more]
TBA_OXYGR1.952e-6789.71Tubulin alpha chain OS=Oxytricha granulifera PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-029-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661122 ID=EY661122; Name=EY661122; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGGGCAAGTATATGGCCTGCTGTTTGATGTATCGTGGTGAT
GTTGTGCCTAAGGATGTGAATGCAGCTGTGGCCACCATCAAGACCAAGCG
CACAATTCAGTTTGTTGACTGGTGCCCTACTGGATTCAAGTGTGGTATCA
ACTATCATCCACCAACTGTGGTCCCTGGCGGTGACCTTGCCAAGGTGCAG
AGGGCTGTCTGCATGATTTCCAACTCCACCATCGGTGCTGAAGTGTTTTC
TCGCATTGATCACAAGTTTGACCTAATGTATGCCAAGCGTGCTTTTGTGC
ACTGGTATGTTGGTGAGGGAATGGAGGAAGGACATTTCTCTGAGGACCGG
GAGGATCTTGCTGCCCTGGAGAACGATTATGAAAACGTTAGTGCACAATC
TGCTGAGGGGGACGATGGACACCATCGACATGAGTATTAATTGTGTTTGT
GCACTGATAACGGATGAGCCATCTTTCCTTTCTTATGTTGTTCTGGATGA
TGTTGTCCAATAATGTTGGGGGAGCTCTATGTGCCTGTGCACTGACATTG
TAATTGATTTCTTAAGACTTGGTTGATTATGGTATCGGTAACCGTGATCC
ATGGGTCTTGCTTATAAAATTGCTATTGGCATCAACCCAATTATGATGAT
TGCCGGAAAATTGTAAAGAGGCAATGCTCGGAGAACCCGTTAATTTGATC
AGGCAGAGGTACCGTGGGGGCGCTGACATTATCATCAAGGAAAAAAGCGC
TGGCTCATGATTCATGACCTTTATGCAAGAGCTGGTCTAATGGGTGGCAC
CGCCCAATTTTTGATAACACCAAATGGGTAACCCCTCACTCTCCACATTG
ATGATAACCAAGTAGTTCCAACTTCCTGGATTGACCAAAAGGAGAAAACC
CCACCC
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