EY661122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_ELEIN (Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.765e-68 Identity = 124/144 (86.11%), Postives = 128/144 (88.89%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISNST EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ EG++G EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDEGEEGDEGDEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA2_MAIZE (Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.306e-68 Identity = 124/144 (86.11%), Postives = 128/144 (88.89%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISNST EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ EG++G EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDEGEEGDDGDEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA2_HORVU (Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.011e-68 Identity = 124/144 (86.11%), Postives = 127/144 (88.19%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PP VVPGGDLAKVQRAVCMISNST EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ +G+DG EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPGVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEFDDGEDGDEGDEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 8.761e-68 Identity = 123/144 (85.42%), Postives = 127/144 (88.19%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKVQRAVCMISNST E+FSR+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE D+E V A+SAEG EY Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDFEEVGAESAEGAGEGEGEEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA_DAUCA (Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.144e-67 Identity = 124/144 (86.11%), Postives = 127/144 (88.19%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCLMYRGDVVPKDVNAAV TIKTKRTIQFVDWCPTGFKCGINY PTVVPGGDLAKVQRAVCMISNST AEVFSRID KFDLMY+KRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+SAEGDD +Y Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDTKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGDDEDEGEDY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67 Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSA--EGDDG 419 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISN+T AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ A EGD+G Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDEGDEG 447
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67 Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSA--EGDDG 419 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISN+T AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ A EGD+G Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDEGDEG 447
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67 Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSA--EGDDG 419 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISN+T AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ A EGD+G Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDEGDEG 447
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_HORVU (Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67 Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSA--EGDDG 419 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINY PP+VVPGGDLAKVQRAVCMISN+T AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A+ A EGD+G Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDEGDEG 447
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA_OXYGR (Tubulin alpha chain OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.952e-67 Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGD 413 R GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY PPTVVPGGDLAKV RAVCMISNST AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V ++AEG+ Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETAEGE 443 The following BLAST results are available for this feature:
BLAST of EY661122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661122 ID=EY661122; Name=EY661122; organism=Citrus sinensis; type=EST; length=906bpback to top |