EY661122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1B_BOVIN (Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 4.500e-64 Identity = 114/144 (79.17%), Postives = 124/144 (86.11%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE RED+AALE DYE V S EG+ EY Sbjct: 308 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY 451
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 5.877e-64 Identity = 118/137 (86.13%), Postives = 123/137 (89.78%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDD 416 R GKYMACCLMYRGDVVPKDV AAVA IKTKRTIQFVDWCPTGFKCGINY P+VVPGGDLAKVQRA+CMISN+T AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V A++ GDD Sbjct: 308 RHGKYMACCLMYRGDVVPKDVTAAVAVIKTKRTIQFVDWCPTGFKCGINYQAPSVVPGGDLAKVQRALCMISNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETV-GDD 443
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA_XENLA (Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 7.675e-64 Identity = 113/137 (82.48%), Postives = 124/137 (90.51%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDD 416 R GKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE RED+AALE DYE V A SA+ +D Sbjct: 308 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADAED 444
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBAT_ONCMY (Tubulin alpha chain, testis-specific OS=Oncorhynchus mykiss PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.002e-63 Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGD 413 R GKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V S EG+ Sbjct: 308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGE 443
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA3_DROME (Tubulin alpha-3 chain OS=Drosophila melanogaster GN=alphaTub84D PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.309e-63 Identity = 115/144 (79.86%), Postives = 125/144 (86.81%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V S +G +G EY Sbjct: 308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDG-EGEGAEEY 450
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_DROME (Tubulin alpha-1 chain OS=Drosophila melanogaster GN=alphaTub84B PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.309e-63 Identity = 115/144 (79.86%), Postives = 125/144 (86.81%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDDGHHRHEY 437 R GKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V S +G +G EY Sbjct: 308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDG-EGEGAEEY 450
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1D_BOVIN (Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.309e-63 Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGD 413 R GKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE RED+AALE DYE V S EG+ Sbjct: 308 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGMDSVEGE 443
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA8_CHICK (Tubulin alpha-8 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.233e-63 Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGDD 416 R GKYMACC++YRGDVVPKDVNAA+A IKTKRTIQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V S +G+D Sbjct: 183 RHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSMDGED 319
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA2_PATVU (Tubulin alpha-2/alpha-4 chain OS=Patella vulgata GN=TUB2 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.233e-63 Identity = 112/136 (82.35%), Postives = 122/136 (89.71%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGD 413 R GKYM+CC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V S EG+ Sbjct: 308 RHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGE 443
BLAST of EY661122 vs. ExPASy Swiss-Prot
Match: TBA1_PARLI (Tubulin alpha-1 chain OS=Paracentrotus lividus PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.233e-63 Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 3 Query: 6 RPGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYHPPTVVPGGDLAKVQRAVCMISNSTIGAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGHFSEDREDLAALENDYENVSAQSAEGD 413 R GKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINY PPTVVPGGDLAKVQRAVCM+SN+T AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG FSE REDLAALE DYE V SA+ + Sbjct: 308 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSADAE 443 The following BLAST results are available for this feature:
BLAST of EY661122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661122 ID=EY661122; Name=EY661122; organism=Citrus sinensis; type=EST; length=906bpback to top |