EY661118

Overview
NameEY661118
Unique NameEY661118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661118 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.136e-26
Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 3
Query:  204 AHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV---RDELDFEFLGNRTGQPYTVHTNIYANG--KGDREQRVNLWFDPAADYHLYTILWNHHHIVFYGDDAPIRVYKNSG--RAPFPMNQPMGVYSTL 656
            AH  Q+ G  A +L LD++SG G  SK +Y +G  S ++KL  G ++G V AFY+ SN E      DE+D E LG      +T+ TN+YANG  +  RE++   WFDP   +H YT++WN HH VF  D+ P+R + N G   + +P ++PM +Y T+
Sbjct:   53 AHNIQVNGSLA-KLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYL-SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTV 207          
BLAST of EY661118 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.643e-26
Identity = 67/174 (38.51%), Postives = 100/174 (57.47%), Query Frame = 3
Query:  162 PATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRD--ELDFEFLGNRTGQPYTVHTNIYANGKGDR--EQRVNLWFDPAADYHLYTILWNHHHIVFYGDDAPIR--VYKNSGRAPFPMNQPMGVYSTLLES 665
            P  F E     + + +L +    R+++L+LD+ +G GF S   Y  G  S  IKL    +AG V AFY ++    V+D  ELD EFLGN  G+P+   TN+Y NG  +R  E+R  LWFDP+ ++H Y+ILW    I+F+ DD PIR  + K      +P  +PM +Y+T+ ++
Sbjct:   37 PIFFDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYP-QKPMSLYATIWDA 209          
The following BLAST results are available for this feature:
BLAST of EY661118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH33_ARATH2.136e-2641.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH3.643e-2638.51Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-029-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661118 ID=EY661118; Name=EY661118; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGACAACATATAATTAAAGTTCTCTTTCTAATTAGTAACAG
ATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAA
TGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCG
TTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCC
GATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCT
AGACCAAAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCG
GGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACT
GTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCT
TGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACAGTCCACA
CCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAAAGAGTGAACCTC
TGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCA
TCACCATATTGTCTTCTATGGGGATGATGCGCCCATCAGGGTTTACAAAA
ACAGTGGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATTCA
ACGCTGTTGGAAAGCAGATGACTGGGCAACAACAGGTGGTCTAAAGAAAA
TAATTTTGGAGCAAAGCTCTTTTTTATCCTATTACAAAGACTTTGATTTT
GAGGGCTGCCCATTTCTTGGACCCCAAACTGTGGCTCGAACCCGGGTACC
TGGGGGGAGGCAATTATTATCCAGCCCTCCCGGCCTGGAACCAAAAAACA
CAATGGTCCTCTCACCACTGATCTAGATTTGGCCTGAAAACCA
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